DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and Tubal3

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001099588.1 Gene:Tubal3 / 291287 RGDID:1305289 Length:382 Species:Rattus norvegicus


Alignment Length:396 Identity:256/396 - (64%)
Similarity:316/396 - (79%) Gaps:18/396 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 HDTSANDARTFFTETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARG 117
            |.|.:.|  |||.||..||.|||::|:||||||||.||.|....|:|||||::||||||||||||
  Rat     3 HRTVSLD--TFFHETSTGKHVPRTLFMDLEPTVIDGVRVGKYHSLFHPEQLVNGKEDAANNYARG 65

  Fly   118 RYSIGKEVIDRVTSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAV 182
            |||                ||||..||||||:.|.||||||||||||:||||.:|.||.||:|:|
  Rat    66 RYS----------------AEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKTKLEFSV 114

  Fly   183 YPSPKVSTAVVEPYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVS 247
            ||||::||||||||||:||||||:::|||.|||||||:|:||:..|||:.|:|.::||||||::|
  Rat   115 YPSPRISTAVVEPYNAILTTHSTIEYSDCTFMVDNEAVYNICHRKLGVEHPSYSSINRLIAQVLS 179

  Fly   248 STTASLRFSGSMNVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNM 312
            |.||||||.|.:||||.||||||||:||||||:...||::|||::..|..::..:|.:|||.||.
  Rat   180 SITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITTLAPIISAEKAYQEHLSVPDITASCFELSNQ 244

  Fly   313 MVKCDPRAGKFMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDG 377
            :||||||.||:||||:||||||||||||.|::|:||:..:|||||||||||:|||.:.|..||.|
  Rat   245 LVKCDPRLGKYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINCQPPTVVPGG 309

  Fly   378 DLAKTSRACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERD 442
            |||:..||.|||||||||..|::.|.:|||||:.|:||:|||:.||||.|||.||||::|.||:|
  Rat   310 DLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFEEAREDLAALEKD 374

  Fly   443 FEEVGL 448
            :|||||
  Rat   375 YEEVGL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 252/392 (64%)
Tubal3NP_001099588.1 alpha_tubulin 7..378 CDD:276955 250/388 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.770

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