DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and Tubb4a

DIOPT Version :10

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_033477.2 Gene:Tubb4a / 22153 MGIID:107848 Length:444 Species:Mus musculus


Alignment Length:463 Identity:183/463 - (39%)
Similarity:271/463 - (58%) Gaps:28/463 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            |||:|.:|.||||.|||...||:...||||:..|        |..|.|     |........::.
Mouse     1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTG--------TYHGDS-----DLQLERINVYYN 52

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            |...|..|||::.|||||..:|.||:|...:::.|:..:.|:..|.||:|:|.|:.|.|::|.|.
Mouse    53 EATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVL 117

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            ..::|.||.||.||||.:.||||||||||..:||:.::..::..:....|:|.||||||..||||
Mouse   118 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEP 182

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            |||.|:.|..::::|..:.:||||:||||..:|.:..|.|.:||.|::..:|..|..|||.|.:|
Mouse   183 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLN 247

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITT--LTNACFESSNMMVKCDPRAGKF 323
            .||.:...|:|||||:||.:..:|||.|  |.:.:..|:|.  ||...|::.|||..||||.|::
Mouse   248 ADLRKLAVNMVPFPRLHFFMPGFAPLTS--RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRY 310

  Fly   324 MACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCM 388
            :....::||.:..|:|:..:.:::||....||:|.|...|..:     ..:|...|   ..|...
Mouse   311 LTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAV-----CDIPPRGL---KMAATF 367

  Fly   389 LSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEE 453
            :.|:|||...|..:|.:|..||:::||:|||.||||:|.|||||..|:..|..::::.....|||
Mouse   368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE 432

  Fly   454 GGDEDFDE 461
            |   :|:|
Mouse   433 G---EFEE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 176/445 (40%)
Tubb4aNP_033477.2 PLN00220 1..427 CDD:215107 177/448 (40%)
MREI motif. /evidence=ECO:0000250|UniProtKB:P07437 1..4 2/2 (100%)

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