DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and TUBB

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001280141.1 Gene:TUBB / 203068 HGNCID:20778 Length:464 Species:Homo sapiens


Alignment Length:443 Identity:174/443 - (39%)
Similarity:258/443 - (58%) Gaps:27/443 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTETGNGKQVPRSIFVDLEPTV 85
            ||:...||||:..|        |..|.|     |...:....::.|...||.|||:|.|||||..
Human    41 WEVISDEHGIDPTG--------TYHGDS-----DLQLDRISVYYNEATGGKYVPRAILVDLEPGT 92

  Fly    86 IDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTSRLQKIAEQCDSLQGFLIFH 150
            :|.||:|...:::.|:..:.|:..|.||:|:|.|:.|.|::|.|...::|.||.||.||||.:.|
Human    93 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 157

  Fly   151 SLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPYNALLTTHSTMDHSDCVFMV 215
            |||||||||..:||:.::..:|..:....|:|.||||||..|||||||.|:.|..::::|..:.:
Human   158 SLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 222

  Fly   216 DNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNVDLNEFQTNLVPFPRIHFPL 280
            ||||:||||..:|.:..|.|.:||.|::..:|..|..|||.|.:|.||.:...|:|||||:||.:
Human   223 DNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 287

  Fly   281 VAYAPLMSAERSAHEQHAITT--LTNACFESSNMMVKCDPRAGKFMACCMLYRGDVVPKDVNAAV 343
            ..:|||.|  |.:.:..|:|.  ||...|::.|||..||||.|:::....::||.:..|:|:..:
Human   288 PGFAPLTS--RGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM 350

  Fly   344 SAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSNTTAISVAFSNLSYKFDL 408
            ..:::|....||:|.|...|..:     ..:|...|   ..|...:.|:|||...|..:|.:|..
Human   351 LNVQNKNSSYFVEWIPNNVKTAV-----CDIPPRGL---KMAVTFIGNSTAIQELFKRISEQFTA 407

  Fly   409 MFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGGDEDFDE 461
            ||:::||:|||.||||:|.|||||..|:..|..::::.....|||  :|||.|
Human   408 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE--EEDFGE 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 167/426 (39%)
TUBBNP_001280141.1 PLN00220 39..449 CDD:215107 167/430 (39%)
beta_tubulin 39..446 CDD:276956 167/427 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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