DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and mec-7

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_509313.1 Gene:mec-7 / 181036 WormBaseID:WBGene00003171 Length:441 Species:Caenorhabditis elegans


Alignment Length:463 Identity:188/463 - (40%)
Similarity:270/463 - (58%) Gaps:27/463 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVG-HDTSANDARTFF 64
            |||:|.||.||||.|||:..||:...||||:..|..              || .|........::
 Worm     1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQY--------------VGDSDLQLERINVYY 51

  Fly    65 TETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRV 129
            .|.|:.|.|||::.|||||..:|.||:|...:|:.|:..:.|:..|.||:|:|.|:.|.|::|.|
 Worm    52 NEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNV 116

  Fly   130 TSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVE 194
            ...::|.||..|.||||.:.||||||||||..:||:.::..:|..:....|:|.||||||..|||
 Worm   117 LDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181

  Fly   195 PYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSM 259
            ||||.|:.|..::::|..|.:||||:||||..:|.:..|.|.:||.|::..:|..|..|||.|.:
 Worm   182 PYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQL 246

  Fly   260 NVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITT--LTNACFESSNMMVKCDPRAGK 322
            |.||.:...|:|||||:||.:..:|||.|  ||..:..|||.  ||..||::.|||..||||.|:
 Worm   247 NADLRKLAVNMVPFPRLHFFMPGFAPLTS--RSNQQYRAITVPELTQQCFDAKNMMAACDPRHGR 309

  Fly   323 FMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACC 387
            ::....::||.:..|:|:..:..|::|....||||.|...|..:     ..:|...|   ..:..
 Worm   310 YLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV-----CDIPPRGL---KMSAT 366

  Fly   388 MLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAE 452
            .:.|:|||...|..:|.:|..||:::||:|||.||||:|.|||||..|:..|..::::.....|:
 Worm   367 FIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAAD 431

  Fly   453 EGGDEDFD 460
            |...|.||
 Worm   432 EDAAEAFD 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 182/446 (41%)
mec-7NP_509313.1 PLN00220 1..426 CDD:215107 183/448 (41%)
beta_tubulin 2..426 CDD:276956 182/447 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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