DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tbb-6

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_506075.2 Gene:tbb-6 / 179680 WormBaseID:WBGene00006539 Length:426 Species:Caenorhabditis elegans


Alignment Length:446 Identity:157/446 - (35%)
Similarity:249/446 - (55%) Gaps:28/446 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            |:|::::|:||||.|||...||....|||:..||:.|        |.:.|     ......:::.
 Worm     1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYK--------GDNGS-----QLERITSYYK 52

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            |....|.|||:|.|||:|..|:.||:....:|:.||..:||:..|.||::||.|..|.|::|:|.
 Worm    53 EMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            |.:::.||..|||:||.:.||||||||||..|||:.:|..:||.|.....::.||.|||..||||
 Worm   118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEP 182

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVD-RPAYRNLNRLIAQIVSSTTASLRFSGSM 259
            |||:|:....||:.|..|.:|||||:|||..:|.:: |..|.:||.|.:..:|..|...||.|::
 Worm   183 YNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNL 247

  Fly   260 NVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFM 324
            ..|:.:.  |....||:||.:.::||:........:..:|:.||....::.|:|. |:...|||:
 Worm   248 KTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFL 309

  Fly   325 ACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCML 389
            :..::|||....|.....:.:::::...:.::..|......:     ..:|...| |||  ...:
 Worm   310 SSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDV-----CDIPSRGL-KTS--ATFI 366

  Fly   390 SNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEE 445
            :|:|||......:|.:|..:|:::||:|||.   |||.|||:|...:..|..:|::
 Worm   367 ANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQ 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 156/445 (35%)
tbb-6NP_506075.2 PTZ00010 1..421 CDD:240228 157/446 (35%)
beta_tubulin 2..421 CDD:276956 156/445 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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