DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tba-7

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_499463.1 Gene:tba-7 / 176568 WormBaseID:WBGene00006533 Length:444 Species:Caenorhabditis elegans


Alignment Length:460 Identity:293/460 - (63%)
Similarity:378/460 - (82%) Gaps:17/460 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            ||||:||.:||.|:||||||||||.|||||..||:     .:...|:|.|:|         |||:
 Worm     1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-----SMEPDGNSGSLG---------TFFS 51

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            :||.|:.|||||||||||||:|::|.|..::|:||||:::||||||||||||.|::|||:||...
 Worm    52 DTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTL 116

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            .|::::|..|:.||||.:|||.||||||||||:|:||||.:|.||.||:|::||:|::||:||||
 Worm   117 DRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEP 181

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            ||::||||:|::||||.||||||||||||..:|.|.||.|.||||:|:|:|||.||||||.|::|
 Worm   182 YNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITASLRFDGALN 246

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            ||||||||||||:||||||||||.||:|:  :.||..::..:|.:|||:||.||||||:.||:||
 Worm   247 VDLNEFQTNLVPYPRIHFPLVAYNPLISS--AHHEFLSVDEITKSCFEASNQMVKCDPKHGKYMA 309

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            .|:|||||||||||:||:.:||::|.:|||||||||||:|:||:.|..:|.||:||..||.||||
 Worm   310 VCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLS 374

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLD-NAEEG 454
            |||||:.|:..|.||||||:.||||||||||||||||||:||||::|.||:|:||||.| :|.:.
 Worm   375 NTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSDANDN 439

  Fly   455 GDEDF 459
            ||:::
 Worm   440 GDDEY 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 285/443 (64%)
tba-7NP_499463.1 PTZ00335 1..443 CDD:185562 293/457 (64%)
alpha_tubulin 2..430 CDD:276955 285/443 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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