DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tbg-1

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_499131.1 Gene:tbg-1 / 176361 WormBaseID:WBGene00006540 Length:444 Species:Caenorhabditis elegans


Alignment Length:430 Identity:120/430 - (27%)
Similarity:215/430 - (50%) Gaps:50/430 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDAR-TFFTET 67
            ::::.:||||.|:..|.|:..:.|||||..|               ...|:...||.: ..|.:.
 Worm     7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERG---------------QTTHEDDMNDKKDLLFYQA 56

  Fly    68 GNGKQVPRSIFVDLEPTVIDDVRNGCMR-----ELYHPEQLISGKE--DAANNYARGRYSIGKEV 125
            .:...|||::.|||||.||    ||.|:     .|::.:.:.....  .|.||:|.| |..|:||
 Worm    57 DDDHYVPRAVLVDLEPRVI----NGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEV 116

  Fly   126 IDRVTSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVST 190
            .:::...:.:.||..::|.|.|..||:.||||||..|||:|||...:.||....::|:.:...||
 Worm   117 QEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTST 181

  Fly   191 -AVVEPYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLR 254
             .||.|||.:|:....:::.|.|.::||.|::.:.......|.|.:.::|.|:|:|:|::||..|
 Worm   182 DVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYR 246

  Fly   255 FSGSMNVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPR 319
            |:.:|...:.  ..:|.|||.:||...|.:|::....:...:.::..:|....:.::|||....|
 Worm   247 FNSAMCPSIR--YLDLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASR 309

  Fly   320 AGK---FMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAK 381
            ...   .::..|..:|.:      .|.:.:.:::::.|....|..:.:     ||..:....|:.
 Worm   310 VRPNDCMLSAYMFLQGQI------EAHTIMTAEQNVDFAIRRPPFYML-----KPLRMMHAPLSP 363

  Fly   382 TSR-----ACCMLSNTTAISVAFSNLSYKFDLMFKKRAFV 416
            ..|     :..:|:|:|:::..|.:|..|:|.:..||||:
 Worm   364 YVRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFI 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 120/430 (28%)
tbg-1NP_499131.1 gamma_tubulin 5..431 CDD:276957 120/430 (28%)
PLN00222 7..443 CDD:215108 120/430 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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