DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tba-4

DIOPT Version :10

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_496351.1 Gene:tba-4 / 174680 WormBaseID:WBGene00006530 Length:448 Species:Caenorhabditis elegans


Alignment Length:462 Identity:308/462 - (66%)
Similarity:385/462 - (83%) Gaps:14/462 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            ||||:||.:||.|:||||||||||.|||||..||::.::::  ..|.|.:           |||:
 Worm     1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQ--NEGGSFT-----------TFFS 52

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            :||||:.|||||||||||||:|::|.|..::|:||||:|:||||||||||||.|::|||:||...
 Worm    53 DTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTL 117

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            .|::::|:.|..||||.:|||.||||||||||||:||||.||.||.||:|::||:|:||||||||
 Worm   118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 182

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            ||::||||:|::||||.||||||||||||..:|.||||:|.||||:|:|:|||.||||||.|::|
 Worm   183 YNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALN 247

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            ||||||||||||:|||||||.:|.||:|||::.||..::..:||:|||.:|.|||||||.||:||
 Worm   248 VDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMA 312

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            .|:||||||||||||.|::|||:||.:|||||||||||:||||:.|..||.|||||..||.||||
 Worm   313 VCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGG 455
            |||||:.|:|.|.||||||:.|||||||||||||||||||||||::|.||:|:||||.| :.||.
 Worm   378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGAD-SNEGL 441

  Fly   456 DEDFDEF 462
            :||.:|:
 Worm   442 EEDGEEY 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 298/443 (67%)
tba-4NP_496351.1 PTZ00335 1..446 CDD:185562 307/458 (67%)

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