DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tba-1

DIOPT Version :10

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001251212.1 Gene:tba-1 / 172831 WormBaseID:WBGene00006528 Length:454 Species:Caenorhabditis elegans


Alignment Length:462 Identity:310/462 - (67%)
Similarity:386/462 - (83%) Gaps:13/462 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            ||||:||.:||.|:||||||||||.|||||..||::.:.::  |.|.|.:           |||:
 Worm     6 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQ--ADGESFT-----------TFFS 57

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            :||||:.|||||||||||||:|::|.|..::|:||||:|:||||||||||||.|::|||:||.|.
 Worm    58 DTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 122

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            .|::::|:.|..||||.:|||.||||||||||||:||||.||.||.||:|::||:|:||||||||
 Worm   123 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP 187

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            ||::||||:|::||||.||||||||||||..:|.||||:|.||||:|:|:|||.||||||.|::|
 Worm   188 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALN 252

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            ||||||||||||:|||||||.||.||:||:::.||..::..:||:|||.:|.|||||||.||:||
 Worm   253 VDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMA 317

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            .|:||||||||||||.|::|||:||.||||||||||||:||||:.|..||.|||||..||.||||
 Worm   318 VCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 382

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGG 455
            |||||:.|:|.|.||||||:.|||||||||||||||||||||||::|.||:|:||||.|:.|.|.
 Worm   383 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGGN 447

  Fly   456 DEDFDEF 462
            :|:.:|:
 Worm   448 EEEGEEY 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 301/443 (68%)
tba-1NP_001251212.1 PTZ00335 6..442 CDD:185562 305/448 (68%)

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