DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tba-6

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_492419.2 Gene:tba-6 / 172717 WormBaseID:WBGene00006532 Length:464 Species:Caenorhabditis elegans


Alignment Length:456 Identity:295/456 - (64%)
Similarity:371/456 - (81%) Gaps:11/456 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTE 66
            |||:||.:||.|:|||||||||:.|||||..||  ...|:.|         :|.......|||.|
 Worm     8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG--YHVEDDT---------YDEETETINTFFAE 61

  Fly    67 TGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTS 131
            |..||.|||.:||||||||:|:||.|..|.|:|||||:||||||||.||||||:||:|:||.|..
 Worm    62 TAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126

  Fly   132 RLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPY 196
            |::::||.|:.||||:||||.||||||||.|||:|||||:|.||.||:||:||:|:|||::||||
 Worm   127 RVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPY 191

  Fly   197 NALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNV 261
            |::|.||:|::||||.||||||||||||..:|.:.||.|.|||||:|||:||.||||||.|::||
 Worm   192 NSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNV 256

  Fly   262 DLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMAC 326
            ||.||||||||:||||||||.||||:||||::|||:.::.:|:||||....|||||||.||:||.
 Worm   257 DLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAV 321

  Fly   327 CMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSN 391
            |:||||||||||:|:|::|:|:||.:|||:|||||||:||||:.|..||.|||.|.:|:.||:||
 Worm   322 CLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISN 386

  Fly   392 TTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGGD 456
            ||||:.|::.|.:|||||:.||||||||||||||||||:||||::|.||:|:||:|.|...:..|
 Worm   387 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDID 451

  Fly   457 E 457
            :
 Worm   452 D 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 291/443 (66%)
tba-6NP_492419.2 PTZ00335 8..453 CDD:185562 295/456 (65%)
alpha_tubulin 8..441 CDD:276955 291/443 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S25
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.730

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