DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tuba1al

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_031749742.1 Gene:tuba1al / 100486465 XenbaseID:XB-GENE-22063596 Length:487 Species:Xenopus tropicalis


Alignment Length:460 Identity:305/460 - (66%)
Similarity:377/460 - (81%) Gaps:14/460 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTE 66
            |||:|:.:||.|:||||||||||.|||||..||.|...|.::....|.|           |||.|
 Frog    41 REVISVHVGQAGVQIGNACWELYCLEHGILPDGRLIGDEIVSEEDESFS-----------TFFNE 94

  Fly    67 TGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTS 131
            |..||.||.::||||||||||:||.|..::|:||||||:|.||||||||||.|:||:|::|.|..
 Frog    95 TSGGKYVPHAVFVDLEPTVIDEVRKGAYQKLFHPEQLITGMEDAANNYARGHYTIGREIVDLVLE 159

  Fly   132 RLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPY 196
            |::|:|:||.:|||||||||.||||||||||||:||||.||.:|.||:|::|||||:||||||||
 Frog   160 RIRKMADQCTALQGFLIFHSFGGGTGSGFTSLLMERLSVDYGRKSKLEFSIYPSPKMSTAVVEPY 224

  Fly   197 NALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNV 261
            |::||||:|::||||.|:||||||||||..:|.::||.:.||||||.|||||.||||||.|::||
 Frog   225 NSILTTHATLEHSDCAFLVDNEAIYDICQRNLDIERPTHSNLNRLIGQIVSSITASLRFDGALNV 289

  Fly   262 DLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMAC 326
            ||.|||||||||||||||:::|||::||||:.||:.:|..:|.|||||:|.|||||||.||:|||
 Frog   290 DLAEFQTNLVPFPRIHFPVISYAPVISAERAYHEKLSIAEITTACFESTNQMVKCDPRHGKYMAC 354

  Fly   327 CMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSN 391
            |:||||||||||||.|:::|||:|.||||||||||||:||||:.|..||.|||||..||.|||||
 Frog   355 CLLYRGDVVPKDVNVAIASIKSRRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 419

  Fly   392 TTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGGD 456
            ||||:.|::.|.:|||||:.||||||||||||||||||:||||::|.||:|::|:..:..||   
 Frog   420 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYDEIASEYVEE--- 481

  Fly   457 EDFDE 461
            ||.:|
 Frog   482 EDGEE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 299/443 (67%)
tuba1alXP_031749742.1 PTZ00335 41..476 CDD:185562 300/445 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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