DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tuba8

DIOPT Version :10

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001090799.1 Gene:tuba8 / 100037894 XenbaseID:XB-GENE-491247 Length:456 Species:Xenopus tropicalis


Alignment Length:458 Identity:304/458 - (66%)
Similarity:371/458 - (81%) Gaps:13/458 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTE 66
            ||.:|:.|||.|:|||||||||:.|||||..||.|         ...:.||  :||:...|||:|
 Frog     9 RECISVHIGQAGLQIGNACWELFCLEHGIQPDGIL---------SDQSKVG--SSADSFTTFFSE 62

  Fly    67 TGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTS 131
            :.|||.|||:|.||||.||.|::|.|..|.|:|||..|:.|||||||||||.|:||||:||.|..
 Frog    63 SSNGKHVPRAILVDLETTVADEIRVGEYRHLFHPEHFITSKEDAANNYARGHYTIGKEIIDLVLD 127

  Fly   132 RLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPY 196
            :::|..:.|.||||||:|||.||||||||||||:||||.||.||.||:||:||:|::||||||||
 Frog   128 QIRKQTDACSSLQGFLVFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPRISTAVVEPY 192

  Fly   197 NALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNV 261
            |::||||:|::||||.||||||||||:|:.:|.::||.|..|||||:|||||.||||||.|::||
 Frog   193 NSILTTHTTLEHSDCAFMVDNEAIYDLCHRNLDIERPTYMALNRLISQIVSSITASLRFDGALNV 257

  Fly   262 DLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMAC 326
            ||.||||||||:||||||||.|||::||.::.|||.::..:||||||..|.|||||||.||:|||
 Frog   258 DLTEFQTNLVPYPRIHFPLVTYAPIISANKAYHEQLSVADITNACFEPCNQMVKCDPRHGKYMAC 322

  Fly   327 CMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSN 391
            ||||||||||||||.|:::||:||.||||||||||||:||||:.|..||.|||||..||.|||||
 Frog   323 CMLYRGDVVPKDVNVAIASIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 387

  Fly   392 TTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEE--G 454
            ||.|:.|::.|.:||||||.||||||||||||||||||:||||::|.||:|:||||:|:.||  .
 Frog   388 TTVIAEAWARLDHKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSFEEENE 452

  Fly   455 GDE 457
            |:|
 Frog   453 GEE 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 296/443 (67%)
tuba8NP_001090799.1 PTZ00335 9..446 CDD:185562 299/447 (67%)

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