DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tuba8

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001090799.1 Gene:tuba8 / 100037894 XenbaseID:XB-GENE-491247 Length:456 Species:Xenopus tropicalis


Alignment Length:458 Identity:304/458 - (66%)
Similarity:371/458 - (81%) Gaps:13/458 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTE 66
            ||.:|:.|||.|:|||||||||:.|||||..||.|         ...:.||  :||:...|||:|
 Frog     9 RECISVHIGQAGLQIGNACWELFCLEHGIQPDGIL---------SDQSKVG--SSADSFTTFFSE 62

  Fly    67 TGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTS 131
            :.|||.|||:|.||||.||.|::|.|..|.|:|||..|:.|||||||||||.|:||||:||.|..
 Frog    63 SSNGKHVPRAILVDLETTVADEIRVGEYRHLFHPEHFITSKEDAANNYARGHYTIGKEIIDLVLD 127

  Fly   132 RLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPY 196
            :::|..:.|.||||||:|||.||||||||||||:||||.||.||.||:||:||:|::||||||||
 Frog   128 QIRKQTDACSSLQGFLVFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPRISTAVVEPY 192

  Fly   197 NALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNV 261
            |::||||:|::||||.||||||||||:|:.:|.::||.|..|||||:|||||.||||||.|::||
 Frog   193 NSILTTHTTLEHSDCAFMVDNEAIYDLCHRNLDIERPTYMALNRLISQIVSSITASLRFDGALNV 257

  Fly   262 DLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMAC 326
            ||.||||||||:||||||||.|||::||.::.|||.::..:||||||..|.|||||||.||:|||
 Frog   258 DLTEFQTNLVPYPRIHFPLVTYAPIISANKAYHEQLSVADITNACFEPCNQMVKCDPRHGKYMAC 322

  Fly   327 CMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSN 391
            ||||||||||||||.|:::||:||.||||||||||||:||||:.|..||.|||||..||.|||||
 Frog   323 CMLYRGDVVPKDVNVAIASIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 387

  Fly   392 TTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEE--G 454
            ||.|:.|::.|.:||||||.||||||||||||||||||:||||::|.||:|:||||:|:.||  .
 Frog   388 TTVIAEAWARLDHKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSFEEENE 452

  Fly   455 GDE 457
            |:|
 Frog   453 GEE 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 296/443 (67%)
tuba8NP_001090799.1 PTZ00335 9..446 CDD:185562 299/447 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11588
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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