DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CNMaR and Gpr139

DIOPT Version :9

Sequence 1:NP_001027122.2 Gene:CNMaR / 39127 FlyBaseID:FBgn0053696 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001019309.1 Gene:Gpr139 / 209776 MGIID:2685341 Length:345 Species:Mus musculus


Alignment Length:457 Identity:92/457 - (20%)
Similarity:161/457 - (35%) Gaps:144/457 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EYNTTEMDANESA-GEDEEMLRIAFFIGHFVHQYYIPVLCCTGSIGNILSVFVFFRTKLRKLSSS 95
            |:....:.||.|| |           :| ||...|...|.|.|...|||:|.:..:...|:..||
Mouse     2 EHTHAHLAANSSACG-----------LG-FVPVVYYSFLLCLGLPANILTVIILSQLVARRQKSS 54

  Fly    96 F-YLAALAVSDTCFLAGLFAQWLNFLNVDIYNQNYFC----------QFFTFFSYLASFCSVWFV 149
            : ||.|||.:|...|  .|..:::||..|      |.          :......:.:...|:|..
Mouse    55 YNYLLALAAADILVL--FFIVFVDFLLED------FILTMQMPLIPDKIIEVLEFSSIHTSIWIT 111

  Fly   150 VAFTVERFIAVIYPLKRQTMCTVRRAKIVLFCLTLVGCLHCLPYIVIAKPVFMPKLNTTICDLNS 214
            |..||:|:|||.:|||..|:....|.:.|:..:.:...|..:||      .:.|.:.|.  |..|
Mouse   112 VPLTVDRYIAVCHPLKYHTVSYPARTRKVILSVYITCFLTSIPY------YWWPNIWTE--DYIS 168

  Fly   215 EYKEQLALFNYWDTIVVYAVPFTTIAVLNTCTGCTVWKFATVRRTLTMHKMKPQTNSMPSNSSNS 279
            .....:.::.:..|  ||.||.:...:||               ::.::|::.::|         
Mouse   169 TSMHHVLVWIHCFT--VYLVPCSIFFILN---------------SIIVYKLRRKSN--------- 207

  Fly   280 SGGASSAVASYRLSASLKRQKSTGTHPSGQHNVANRQTDDQEQQQQSQQHQINNCQHHCEITQKP 344
                      :||     |..|||                                         
Mouse   208 ----------FRL-----RGYSTG----------------------------------------- 216

  Fly   345 ARRKVQNSSQLKVTKMLLIVSTVFVCLNLPSCLLRIEAYWETESARNQNSTIA--LQYIFHAFFI 407
                       |.|.:|..::::|..|..|..::.:   :....|..||..:.  :..:.:...:
Mouse   217 -----------KTTAILFTITSIFATLWAPRIIMIL---YHLYGAPIQNPWLVHIMLDVANMLAL 267

  Fly   408 TNFGINFVLYCVSGQNFRKAVLSIFRRVSSAQREA------GNTQVTVSEYCRNTGTSTRRRMMT 466
            .|..|||.|||...:.||....:..:.:...|::.      .|..:|.|.:.....:...:.::.
Mouse   268 LNTAINFFLYCFISKRFRTMAAATLKALFKCQKQPVQFYTNHNFSITSSPWISPANSHCIKMLVY 332

  Fly   467 QH 468
            |:
Mouse   333 QY 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNMaRNP_001027122.2 7tm_4 73..>262 CDD:304433 49/199 (25%)
Gpr139NP_001019309.1 7tm_1 36..277 CDD:278431 69/352 (20%)
7tm_4 65..298 CDD:304433 62/344 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848258
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.