DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNMaR and frpr-10

DIOPT Version :10

Sequence 1:NP_001027122.2 Gene:CNMaR / 39127 FlyBaseID:FBgn0053696 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001379889.1 Gene:frpr-10 / 186481 WormBaseID:WBGene00019019 Length:292 Species:Caenorhabditis elegans


Alignment Length:348 Identity:79/348 - (22%)
Similarity:128/348 - (36%) Gaps:105/348 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 CQFF-----TFF--SYLASFCSVWFVVAFTVERFIAVIYPLKRQTMCTVRRAKIVLFCLTLVGCL 188
            |.||     :.|  |.:|...|||..||.||:|||||.:|:||:...|......|||.:|.:..:
 Worm    24 CHFFWRVTVSIFPLSLIAQAGSVWTYVAVTVDRFIAVCFPIKRRVWSTRSNTITVLFVITFISAI 88

  Fly   189 HCLPYIVIAKPVFMPKLNTTICDLNSEYKEQLALFNYWDTIVVYAVPFTTIAVLNTCTGCTVWKF 253
            ..||.....:.....::..|....|..|.|....:.|  ...:..:|:|.|..||          
 Worm    89 FKLPSFFEVRLDHNGEVEPTELRKNEFYIEFYLFYLY--VTFIQLIPWTLIIFLN---------- 141

  Fly   254 ATVRRTLTMHKMKPQTNSMPSNSSNSSGGASSAVASYRLSASLKRQKSTGTHPSGQHNVANRQTD 318
                 .:.:||::                     .:||...::       .|.||:   .|.:.:
 Worm   142 -----AIIIHKVR---------------------LAYRAQEAM-------VHNSGK---LNTKRE 170

  Fly   319 DQEQQQQSQQHQINNCQHHCEITQKPARRKVQNSSQLKVTKMLLIVSTVFVCLNLPSCL-LRIEA 382
            |.|:                                 |||.|..:::.:|:..|:|..: ..::.
 Worm   171 DAER---------------------------------KVTVMATVMTMIFIICNIPPGINYLVDR 202

  Fly   383 YWETESARNQNSTIALQYI--FHAFFITNFGINFVLYCVSGQNFRKAVLSIFRRVS--SAQREAG 443
            |        .|.|:..|.|  .:.....|...|.::|||....||:|.|.:....|  |::..:.
 Worm   203 Y--------SNPTVYRQRIPLSNVLVCVNSASNMMIYCVFNSRFRRAALKLLGCPSFFSSRHGSV 259

  Fly   444 NTQVTVSEYCRNTGTSTRRRMMT 466
            :|::|..|   .|| ..|.|:.|
 Worm   260 STRLTREE---TTG-MLRSRVAT 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNMaRNP_001027122.2 7tmA_FMRFamide_R-like 60..428 CDD:410630 67/306 (22%)
TM helix 1 61..87 CDD:410630
TM helix 2 94..119 CDD:410630
TM helix 3 131..161 CDD:410630 17/36 (47%)
TM helix 4 173..193 CDD:410630 5/19 (26%)
TM helix 5 220..245 CDD:410630 6/24 (25%)
TM helix 6 352..382 CDD:410630 7/30 (23%)
TM helix 7 396..421 CDD:410630 7/26 (27%)
frpr-10NP_001379889.1 7tmA_FMRFamide_R-like <20..242 CDD:410630 67/306 (22%)
TM helix 3 31..61 CDD:410630 14/29 (48%)
TM helix 4 73..93 CDD:410630 5/19 (26%)
TM helix 5 118..143 CDD:410630 7/41 (17%)
TM helix 6 171..201 CDD:410630 9/62 (15%)
TM helix 7 210..235 CDD:410630 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.

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