DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNMaR and frpr-7

DIOPT Version :9

Sequence 1:NP_001027122.2 Gene:CNMaR / 39127 FlyBaseID:FBgn0053696 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_510842.2 Gene:frpr-7 / 185489 WormBaseID:WBGene00018191 Length:414 Species:Caenorhabditis elegans


Alignment Length:398 Identity:80/398 - (20%)
Similarity:157/398 - (39%) Gaps:109/398 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 IGHFVHQYYIPVLCCTGSIGNILSVFVFFRTKLRKLSS-SFYLAALAVSDTCFLAGLFAQWLNFL 120
            :.|.::.|:......||.|.|:|||.:|.|.:.....: .:||..|.:..|..||..|..: :|.
 Worm    28 LSHLLNGYFTAFFVFTGIILNLLSVSIFLRKERAGTPAIQYYLVTLTLWQTALLANAFLLY-SFP 91

  Fly   121 NV---DIYNQNYFCQFFTF---FSYLASFCSVWFVVAFTVERFIAVIYPLKRQTMCTVRRAKIVL 179
            |:   .:.:|..:...:.:   |:......|||.|:..|::|::|:..|||.:.:...||.:.::
 Worm    92 NLWWGHLVSQGTYVYLYPYVYTFANTTHTGSVWIVLTLTIDRYLALCQPLKHRAIGKKRRVRRLM 156

  Fly   180 FCLTLVGCLHCLP-----YIVIAKPVFMPKLNTTICDLNSEYKEQLA---------LFN---YWD 227
            ..::.:..:..:|     ::::            |||     ::||:         ||:   || 
 Worm   157 IVVSAMAVMFSIPRFFEVHVIL------------ICD-----EDQLSCVATIDRTELFDNRLYW- 203

  Fly   228 TI--VVYAVPFTTIAVLNTCTGCTVWKFATVRRTLTMHKMKPQTNSMPSNSSNSSGGASSAVASY 290
            ||  |:.|:.|.|:      ..|.:....|:|.|:.:.....:..|:.:.:|:......| :.|.
 Worm   204 TIYHVILAMVFVTL------LPCLILFALTLRITIALRSAIAKRKSLCAPNSDIDTRCKS-IKSS 261

  Fly   291 RLSASLKRQKSTGTHPSGQHNVANRQTDDQEQQQQSQQHQINNCQHHCEITQKPARRKVQNSSQL 355
            |.::|.|..||         |:                                           
 Worm   262 RYNSSRKDHKS---------NI------------------------------------------- 274

  Fly   356 KVTKMLLIVSTVFVCLNLPSCLLRIEAYWETESARNQNSTIALQYIFHAFFIT-NFGINFVLYCV 419
                ||::|...|:..::...::.:..:...:||..::...:|......|.|. |...||.::.|
 Worm   275 ----MLVLVIAKFLVSDILPTVIDVLEHVVGQSAFMRSPLASLFVDISNFLIVLNCSSNFWVFFV 335

  Fly   420 SGQNFRKA 427
            .|:.||::
 Worm   336 WGKRFRRS 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNMaRNP_001027122.2 7tm_4 73..>262 CDD:304433 51/214 (24%)
frpr-7NP_510842.2 7tmA_FMRFamide_R-like 32..344 CDD:320109 79/394 (20%)
TM helix 1 33..57 CDD:320109 9/23 (39%)
TM helix 2 67..89 CDD:320109 7/22 (32%)
TM helix 3 109..131 CDD:320109 5/21 (24%)
TM helix 4 154..170 CDD:320109 0/15 (0%)
TM helix 5 205..228 CDD:320109 6/28 (21%)
TM helix 6 270..295 CDD:320109 7/80 (9%)
TM helix 7 312..337 CDD:320109 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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