Protein Alignment CNMaR and F16C3.1

DIOPT Version :10

• Sequence 1: NP_001027122.2
• Gene: CNMaR / 39127
• FlyBaseID: FBgn0053696
• Length: 480
• Species: Drosophila melanogaster
• Sequence 2: NP_492672.1
• Gene: F16C3.1 / 184568
• WormBaseID: WBGene00008885
• Length: 399
• Species: Caenorhabditis elegans
• Alignment Length: 443
• Identity: 95/443 - (21%)
• Similarity: 177/443 - (39%)
• Gaps: 116/443 - (26%)

  Fly    63 QYYIPVLCCTGSIGNILSVFVFFRTK--LRKLSSSFYLAALAVSDTCFLAGLFAQWLN-FLNVDI 124
            ::.:|:.|..|.:||.::: :..||.  ||:|:|:.||..|:||...||..:...|.: ::.:.:
 Worm    24 RHLLPIFCFIGILGNSMAL-ILIRTNFWLRRLTSNIYLCTLSVSSCFFLLTVIISWADTYMGLPL 87

  Fly   125 YNQNYF-CQFFTFFSYLASFCSVWFVVAFTVERFIAVIYPLKRQTMCTVR--RAKIVLFCLTLVG 186
            |:::.. |:||:|.::.:.|..||.:...:.:|.|.:..|..|:.:||.:  |...:.|.|:.|
 Worm    88 YSESELGCKFFSFLAHFSDFICVWMISLISCDRMIVLYRPRIRKWVCTKKFSRNMTIGFVLSSV- 151

  Fly   187 CLHCLPYIVIAKPVFMPKLNT--TICDLNSEYK-------EQLALFNYWDTIVVYAVPFTTIAVL 242
            .|:...:::....::..|..|  |.|.|:.:..       :...:|...||.:...:|...|.::
 Worm   152 VLYSWLFLLAGLQIYRLKDGTENTFCGLSQDVNLFGFQVDQHYFMFTLMDTALCTLLPAILIIIV 216

  Fly   243 NTCTGCTVWKFATVR------------------RTLTMHKMKPQTNSMPSNSSNSSGGASSAVAS 289
            |:        |:|.|                  |..|..:.:.|.|      :::.....:.|..
 Worm   217 NS--------FSTYRYRQCMKIYSSGVLRVRFVRAPTTQQQQQQLN------NDTIQFEETTVKK 267

  Fly   290 YRLSASLKRQKSTGTHPSGQHNVANRQTDDQEQQQQSQQHQINNCQHHCEITQKPARRKVQNSSQ 354
            |.||                       ||:......:...|..||            .|:: ||.
 Worm   268 YLLS-----------------------TDNTHSNLPTSSTQSRNC------------GKLR-SSD 296

  Fly   355 LKVTKMLLIVSTVFVCLNLPSCLLRIEAYWETESARNQN----STIALQYIFHAFFITNFGINFV 415
            |::::.|:||::.||.||:||..:||.....:.:....|    .|:.:.|:.||       :.|.
 Worm   297 LQLSRTLIIVTSTFVLLNVPSYAMRILQSIISSAGPLFNFVYYVTLLIYYLHHA-------VLFY 354

  Fly   416 LYCVSGQNFRKAVLSIFRRVSSAQREAGNTQVTVSEYCRNT-------GTSTR 461
            :|.......:|.:.....|:...             ||..|       .|||:
 Worm   355 MYIFWSPQMKKQLKPTAMRLLEC-------------YCLKTVPDFGHRSTSTQ 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CNMaR	NP_001027122.2	7tmA_FMRFamide_R-like	60..428	CDD:410630	88/401 (22%)
		TM helix 1	61..87	CDD:410630	5/23 (22%)
		TM helix 2	94..119	CDD:410630	9/25 (36%)
		TM helix 3	131..161	CDD:410630	9/29 (31%)
		TM helix 4	173..193	CDD:410630	5/21 (24%)
		TM helix 5	220..245	CDD:410630	6/24 (25%)
		TM helix 6	352..382	CDD:410630	14/29 (48%)
		TM helix 7	396..421	CDD:410630	5/24 (21%)
F16C3.1	NP_492672.1	7tm_classA_rhodopsin-like	26..360	CDD:410626	87/392 (22%)
		TM helix 1	26..48	CDD:410626	6/22 (27%)
		TM helix 2	56..83	CDD:410626	9/26 (35%)
		TM helix 3	95..125	CDD:410626	9/29 (31%)
		TM helix 4	138..162	CDD:410626	5/24 (21%)
		TM helix 5	194..229	CDD:410626	9/42 (21%)
		TM helix 6	294..324	CDD:410626	14/29 (48%)
		TM helix 7	335..360	CDD:410626	7/31 (23%)