DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNMaR and Vmn1r-ps103

DIOPT Version :9

Sequence 1:NP_001027122.2 Gene:CNMaR / 39127 FlyBaseID:FBgn0053696 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_598972.2 Gene:Vmn1r-ps103 / 171245 MGIID:2159658 Length:323 Species:Mus musculus


Alignment Length:98 Identity:19/98 - (19%)
Similarity:33/98 - (33%) Gaps:41/98 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 QHHCEITQKPARRKVQNSS-------QLKVTKMLLIVSTVFVCLNLPSCLLRIEAYWETESARNQ 392
            :||.::..      :|||.       :|:..:.:|::...||..           || |:.|   
Mouse   251 KHHQQVLY------LQNSKLLYRTPPELRAAQSVLLLMLCFVFF-----------YW-TDCA--- 294

  Fly   393 NSTIALQYIFHAFFITNFGINFVLYCVSGQNFR 425
                         ..:||...|...|:.|:..|
Mouse   295 -------------LFSNFKSLFKGQCIDGKYSR 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNMaRNP_001027122.2 7tm_4 73..>262 CDD:304433
Vmn1r-ps103NP_598972.2 V1R 79..298 CDD:112227 13/80 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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