DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNMaR and LOC108179223

DIOPT Version :9

Sequence 1:NP_001027122.2 Gene:CNMaR / 39127 FlyBaseID:FBgn0053696 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_017209927.1 Gene:LOC108179223 / 108179223 -ID:- Length:423 Species:Danio rerio


Alignment Length:498 Identity:116/498 - (23%)
Similarity:188/498 - (37%) Gaps:168/498 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ITSSSGNITATTEADFSSSLGESNVTEYNTTEMDANESAGEDEEMLRIAFFIGHFVHQYYIPVLC 70
            :||:..||.:|.....||.       ..|:.|:          :::.|:..:          ::|
Zfish    47 LTSADPNINSTIIPTLSSK-------PENSLEV----------QLVTISLSL----------LIC 84

  Fly    71 CTGSIGNILSVFVFFRTKLRKLSSSFYLAALAVSDTCFL--AGL------FAQWLNFLNVDIYNQ 127
            ..|..|||:.|.|..::|....:::.||.:|||:|...|  |||      .:.|       ||..
Zfish    85 GVGIAGNIMVVLVVIQSKHMMTATNCYLVSLAVADLTVLMAAGLPNISEVTSSW-------IYGY 142

  Fly   128 NYFCQFFTFFSYL---ASFCSVWFVVAFTVERFIAVIYPLKRQTMCTVRRAKIVLFCLTLVGCLH 189
            . .|...|:..||   .|.||   :.|||:||:||:.:.:|.:.:|||.|||.::.|:.:...::
Zfish   143 T-GCVCITYLQYLGINVSSCS---ITAFTIERYIAICHSIKAKLICTVSRAKKIIACVWIFTAIY 203

  Fly   190 CLPYIVIAKPVFMPKLNTTICD----LNSEYKEQLALF---NYWDTIVVYAVPFTTIAVLNTCTG 247
            |:.:.      |:.....|:..    :...|:...:|:   .:.|..:.|.||.....||     
Zfish   204 CIMWF------FLVDTEETVYSNGVVVRCGYRVSRSLYMPIYFMDFTLFYVVPLLVALVL----- 257

  Fly   248 CTVWKFATVRRTLTMHKMKPQTNSMPSNSSNSSGGASSAVASYRLSASLKRQKSTGTHPSGQHNV 312
                 :..:.|.|        ....||:                                   |:
Zfish   258 -----YGLIARIL--------FRDPPSS-----------------------------------NI 274

  Fly   313 ANRQTDDQEQQQQSQQHQINNCQHHCEITQKPARRKVQNSSQLKVTKMLLIVSTVFVCLNLPSCL 377
            :|::...|:.::|      |:.:.:|    ||.|..   ||:.:||:||.:|..||..|.||...
Zfish   275 SNQRFTAQQGRRQ------NSLKVNC----KPNRAA---SSRKQVTQMLAVVVVVFALLWLPYRT 326

  Fly   378 LRIEAYWETESARNQNSTIALQYIFHAFFI-------TNFGINFVLYCVSGQNFRKAVLSIFRRV 435
            |.:           .||.:...|:...|.:       ||..:|.::|....|.||.|    |:|:
Zfish   327 LVV-----------VNSLLDPPYLDTWFLLFSRMCIYTNSAVNPIIYNAMSQKFRAA----FKRL 376

  Fly   436 SSA-----QREAGNTQVTV---------SEYCR----NTGTST 460
            ...     |..||...|||         ||...    ||.|.|
Zfish   377 CDCKHRTDQGRAGTHTVTVYYGVIKELSSENSMKKQDNTNTDT 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNMaRNP_001027122.2 7tm_4 73..>262 CDD:304433 55/206 (27%)
LOC108179223XP_017209927.1 7tm_4 81..>209 CDD:304433 44/154 (29%)
7tm_1 90..362 CDD:278431 85/365 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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