Protein Alignment CNMaR and trhr2

DIOPT Version :9

• Sequence 1: NP_001027122.2
• Gene: CNMaR / 39127
• FlyBaseID: FBgn0053696
• Length: 480
• Species: Drosophila melanogaster
• Sequence 2: XP_002936137.2
• Gene: trhr2 / 100498158
• XenbaseID: XB-GENE-1018399
• Length: 400
• Species: Xenopus tropicalis
• Alignment Length: 429
• Identity: 102/429 - (23%)
• Similarity: 169/429 - (39%)
• Gaps: 117/429 - (27%)

  Fly    64 YYIPVLCCTGSIGNILSVFVFFRTKLRKLSSSFYLAALAVSDTCFL--AG-------LFAQWLNF 119
            :.:..:|..|.||||:.|.|.|.|:..:..::.||.:|||:|...|  ||       |...|
 Frog    33 FLVLFICGIGIIGNIMVVLVVFTTRDMRTPTNCYLVSLAVADLMVLVAAGLPNVSDSLAGTW--- 94

  Fly   120 LNVDIYNQNYFCQFFTFFSYL---ASFCSVWFVVAFTVERFIAVIYPLKRQTMCTVRRAKIVLFC 181
                :|. :..|...|:|.||   ||.||   :.||||||:||:.:|::.||:|||.|||.::..
 Frog    95 ----VYG-HAGCLGITYFQYLGINASSCS---ITAFTVERYIAICHPMRAQTVCTVSRAKRIIAI 151

  Fly   182 LTLVGCLHCLPYIVIAKPVFMPKLNTTICDLNSEYKEQLALFNYWDTIVVYAVPFTTIAVLNTCT 246
            :.:...::|:.:..:. .:.:.|.....|.........|.:: ..|..:.|..|.....:|
 Frog   152 VWIFTSIYCMFWFFLV-DIHVNKSQQVECGYKVSRNLYLPIY-LADFAIFYVTPLLVATIL---- 210

  Fly   247 GCTVWKFATVRRTLTMHKMKPQTNSMPSNSSNSSGGASSAVASYRLSASLKRQKSTGTHPSGQHN 311
                  :..:.|.|.:..: ||                                    ||
 Frog   211 ------YGLIGRILFLSPI-PQ------------------------------------HP----- 227

  Fly   312 VANRQTDDQEQQQQSQQHQINNCQHHCEITQKPARR---KVQNSSQLKVTKMLLIVSTVFVCLNL 373
               ..|.::.:::.|::...:..:.:     ||:.|   |...||:.:|||||.:|..:|..|.:
 Frog   228 ---ESTTERWREKSSKEKTESETEGN-----KPSNRLKTKGALSSRKQVTKMLAVVVVLFALLWM 284

  Fly   374 PSCLLRIEAYWETESARNQNSTIALQYIFHAFFI-------TNFGINFVLYCVSGQNFRKAVLSI 431
            |...|.:           .||.:...|:...|.:       .|..||.|:|.:..|.||.|
 Frog   285 PYRTLVL-----------VNSFMDKPYLDPWFLLFCRICVYANSAINPVIYNLMSQKFRTA---- 334

  Fly   432 FRRVSSAQREAGNTQV--TVSEYCR-----NTGTSTRRR 463
            |:|:.....||....:  |.:.|..     |||...:.:
 Frog   335 FKRLCKCGHEAQRRSIYMTTTSYSMVKDGVNTGGEKKEK 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CNMaR	NP_001027122.2	7tm_4	73..>262	CDD:304433	57/200 (29%)
trhr2	XP_002936137.2	7tmA_TRH-R	30..335	CDD:320126	93/389 (24%)
		TM helix 1	31..55	CDD:320126	8/21 (38%)
		TM helix 2	64..87	CDD:320126	9/22 (41%)
		TM helix 3	102..124	CDD:320126	10/24 (42%)
		TM helix 4	147..163	CDD:320126	1/15 (7%)
		TM helix 5	189..212	CDD:320126	5/33 (15%)
		TM helix 6	269..291	CDD:320126	9/21 (43%)
		TM helix 7	303..328	CDD:320126	6/24 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910