DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNMaR and gpr142

DIOPT Version :9

Sequence 1:NP_001027122.2 Gene:CNMaR / 39127 FlyBaseID:FBgn0053696 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_031750683.1 Gene:gpr142 / 100486047 XenbaseID:XB-GENE-990349 Length:338 Species:Xenopus tropicalis


Alignment Length:408 Identity:87/408 - (21%)
Similarity:150/408 - (36%) Gaps:133/408 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 YIPVLCCTGSIGNILSVFVFFRTKLRKLSSSF-YLAALAVSDTCFLAGLFAQWLNF-LNVDIYNQ 127
            |..:|.|.|...|:|:.....|...|...||: ||.||.:||  .|:.:|..::.| |...|.::
 Frog    36 YYSILLCLGLPVNMLTAVALSRLASRTKKSSYSYLLALTISD--ILSQIFIIFVGFILQTAILHR 98

  Fly   128 ---NYFCQFFTFFSYLASFCSVWFVVAFTVERFIAVIYPLKRQTMCTVRRAKIVLFCLTLVGCLH 189
               :......:...:.::..|:|..|..||:|::|:.|||:.::.....|.:.|:..:.|...:.
 Frog    99 KVPSTLIHVVSVLEFSSNHASIWVTVILTVDRYVALCYPLQYRSFSYPERTRRVIVFVFLSSFVT 163

  Fly   190 CLPYIVIAKPVFMPKLNTTICDLNSEYKEQLALFNYWDTIVVYAVPFTTIAVLNTCTGCTVWKFA 254
            .:|:...: .|:.......:.||         :..:....::|.:|            ||::.. 
 Frog   164 GVPFYWWS-DVWRDPRTPGLLDL---------ILKWTHCFIIYFIP------------CTIFLI- 205

  Fly   255 TVRRTLTMHKMKPQTNSMPSNSSNSSGGASSAVASYRLSASLKRQKSTGTHPSGQHNVANRQTDD 319
                          |||               |..|||      :|.||:               
 Frog   206 --------------TNS---------------VIIYRL------RKRTGS--------------- 220

  Fly   320 QEQQQQSQQHQINNCQHHCEITQKPARRKVQNSSQLKVTKMLLIVSTVFVCLNLP-SCLLRIEAY 383
                        ..||             ::|.   |.|.:||.:::||..|..| :.::.|..|
 Frog   221 ------------KKCQ-------------LRNG---KTTAILLGITSVFAVLWAPRTIVIIIHMY 257

  Fly   384 -------WETESARNQNSTIALQYIFHAFFITNFGINFVLYCVSGQNFR---KAVLSIFRRVSSA 438
                   |:...|.:..:.:||         .|..:||.|||...:.||   :.:|.||||..  
 Frog   258 VSSVNKDWKVHLAMDIGNMLAL---------LNTAVNFFLYCFVNRRFRDTVREILGIFRRCH-- 311

  Fly   439 QREAGNTQVTVSEYCRNT 456
            .:|..:.||   |.|.::
 Frog   312 MKEGQSIQV---EGCSDS 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNMaRNP_001027122.2 7tm_4 73..>262 CDD:304433 39/193 (20%)
gpr142XP_031750683.1 7tmA_GPR142 31..300 CDD:320257 77/375 (21%)
TM helix 1 33..57 CDD:320257 6/20 (30%)
TM helix 2 67..89 CDD:320257 8/23 (35%)
TM helix 3 106..128 CDD:320257 3/21 (14%)
TM helix 4 151..167 CDD:320257 2/15 (13%)
TM helix 5 185..208 CDD:320257 6/58 (10%)
TM helix 6 231..253 CDD:320257 7/21 (33%)
TM helix 7 268..293 CDD:320257 9/33 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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