DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18180 and ctrb.3

DIOPT Version :9

Sequence 1:NP_648341.1 Gene:CG18180 / 39125 FlyBaseID:FBgn0036024 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001017724.1 Gene:ctrb.3 / 550419 ZFINID:ZDB-GENE-050417-229 Length:265 Species:Danio rerio


Alignment Length:267 Identity:85/267 - (31%)
Similarity:119/267 - (44%) Gaps:20/267 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLLTLSAALALVAASPTGLNRTTLLSQGAEGRIVNGYPAPEGKAPYIVGLFIRTDGSNSGAVGAG 68
            ||..||......||...|:.....:..| ..|||||..|.....|:.|.|...|.....|    |
Zfish     3 FLWLLSCVAFFSAAYGCGVPAIPPVVSG-YARIVNGEEAVPHSWPWQVSLQDFTGFHFCG----G 62

  Fly    69 TIIANDWILTAAHCLTGDYVEIHYGS-NWGWNGAYR--QTVRRDNFISHPDWPSQG-GRDIGLIR 129
            ::|...|::|||||.......:..|. |.|.:....  ||::.....:||.:.|.. ..||.|::
Zfish    63 SLINEFWVVTAAHCSVRTSHRVILGEHNKGKSNTQEDIQTMKVSKVFTHPQYNSNTIENDIALVK 127

  Fly   130 -TPHVDFNGLINKIPLPSMNEQNDRY-QDTWCVACGWGGMDNGNL--ADWLQCVDVQIISNSECE 190
             |.....|..::.:.|.   |.:|.: ....||..|||......|  .|.||.|.:.::||.:|:
Zfish   128 LTAPASLNAHVSPVCLA---EASDNFASGMTCVTSGWGVTRYNALFTPDELQQVALPLLSNEDCK 189

  Fly   191 QAYGSVASTDMCTRHADGKSVCGGDSGGPLVTH-DNA-RLVGVITFASVSCHDG-PSGYTRVSDY 252
            ..:||.....|....|.|.|.|.||||||||.. ||. .|||::::.|..|... |..|.||::.
Zfish   190 NHWGSNIRDTMICAGAAGASSCMGDSGGPLVCQKDNIWTLVGIVSWGSSRCDPTMPGVYGRVTEL 254

  Fly   253 LEWIRDQ 259
            .:|: ||
Zfish   255 RDWV-DQ 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18180NP_648341.1 Tryp_SPc 35..256 CDD:214473 74/231 (32%)
Tryp_SPc 36..259 CDD:238113 74/233 (32%)
ctrb.3NP_001017724.1 Tryp_SPc 33..258 CDD:214473 74/231 (32%)
Tryp_SPc 34..261 CDD:238113 76/235 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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