DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18180 and cela1.2

DIOPT Version :10

Sequence 1:NP_648341.1 Gene:CG18180 / 39125 FlyBaseID:FBgn0036024 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001011493.1 Gene:cela1.2 / 496993 XenbaseID:XB-GENE-5739190 Length:265 Species:Xenopus tropicalis


Alignment Length:250 Identity:75/250 - (30%)
Similarity:112/250 - (44%) Gaps:40/250 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RIVNGYPAPEGKAPYIVGLFIRTDGSNSGAVGAGTIIANDWILTAAHC---------LTGDYVEI 90
            |::.|........|:.|.|...:.||.....| |::|..:.:||||||         :.||:   
 Frog    28 RVIGGTEVQRNSWPWQVSLQYLSGGSWYHTCG-GSLIRANRVLTAAHCVDRAVSYRVVVGDH--- 88

  Fly    91 HYGSNWGWNGAYRQTVRRDNFISHPDW-PSQ--GGRDIGLIRTPHVDFNGLINK-IPLPSMNEQN 151
                |...|....|.:.....:.|.:| |:.  .|.||.::   |:..:..:|. :.|..:...|
 Frog    89 ----NIYQNDGTEQYISVSRIVKHANWNPNNIAAGYDISIL---HLSSSATLNSYVKLAQLPADN 146

  Fly   152 ----DRYQDTWCVACGWG-GMDNGNLADWLQCVDVQIISNSECEQA--YGSVASTDMCTRHADG- 208
                ..|.   ||..||| ..:|||||..||...:.:|::|.|...  :||...:.|.....|| 
 Frog   147 VVLAHNYN---CVVTGWGKTSNNGNLASVLQQAPLPVIAHSTCSSGSYWGSTVKSTMVCAGGDGV 208

  Fly   209 KSVCGGDSGGPLVTHDNA--RLVGVITFAS---VSCHDGPSGYTRVSDYLEWIRD 258
            :|.|.|||||||....|.  ::.||.:|.|   .|.:..|:.:||||.|:.||.:
 Frog   209 RSGCQGDSGGPLNCPVNGVYQVHGVTSFVSSSGCSTYLKPTVFTRVSAYIGWINN 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18180NP_648341.1 Tryp_SPc 36..259 CDD:238113 74/248 (30%)
cela1.2NP_001011493.1 Tryp_SPc 29..264 CDD:238113 74/248 (30%)

Return to query results.
Submit another query.