DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18180 and ctrb2

DIOPT Version :9

Sequence 1:NP_648341.1 Gene:CG18180 / 39125 FlyBaseID:FBgn0036024 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001011477.1 Gene:ctrb2 / 496968 XenbaseID:XB-GENE-1002990 Length:263 Species:Xenopus tropicalis


Alignment Length:243 Identity:75/243 - (30%)
Similarity:117/243 - (48%) Gaps:35/243 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RIVNGYPAPEGKAPYIVGLFIRTDGSNSGAVGAGTIIANDWILTAAHC--------LTGDYVEIH 91
            |||||..|..|..|:.|.|..||.....|    |:::.|.|::|||||        :.|:|    
 Frog    33 RIVNGENAVSGSWPWQVSLQDRTGFHFCG----GSLVNNLWVVTAAHCGVTTSHRVILGEY---- 89

  Fly    92 YGSNWGWNGAYRQTVRRDNFISHPDWPSQGG-RDIGLIR-TPHVDFNGLINKIPLPSMNE---QN 151
               :...:....||:.......||::.:... .||.|:: :....||..:..:.:|:.:|   ..
 Frog    90 ---DRSSSAEPIQTMSISRVFKHPNYNTNTMINDITLLKLSSTASFNSRVAPVCIPTSSEVFNSP 151

  Fly   152 DRYQDTWCVACGWGGMD-NGNLA-DWLQCVDVQIISNSECEQAYGSVASTDMCTRHADGKSVCGG 214
            :|     |:..|||.:| ...|: :.||.|.:.::||:||::.:|:...:.|....|.|.|.|.|
 Frog   152 ER-----CITTGWGYVDAYSKLSPNKLQQVTLPLLSNTECQRYWGNKIHSTMICAGASGASSCMG 211

  Fly   215 DSGGPLVTHDNAR--LVGVITFASVSCH-DGPSGYTRVSDYLEWIRDQ 259
            |||||||...|..  |.|::::.|.:|. ..|..|.|||....|: ||
 Frog   212 DSGGPLVCARNGAWVLAGIVSWGSSTCSPSSPGVYARVSTLRSWM-DQ 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18180NP_648341.1 Tryp_SPc 35..256 CDD:214473 72/238 (30%)
Tryp_SPc 36..259 CDD:238113 72/240 (30%)
ctrb2NP_001011477.1 Tryp_SPc 34..259 CDD:238113 74/242 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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