DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18180 and Prss3bl1

DIOPT Version :10

Sequence 1:NP_648341.1 Gene:CG18180 / 39125 FlyBaseID:FBgn0036024 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001101326.1 Gene:Prss3bl1 / 312273 RGDID:1563848 Length:246 Species:Rattus norvegicus


Alignment Length:260 Identity:84/260 - (32%)
Similarity:125/260 - (48%) Gaps:45/260 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LALVAASPTGLNRTTLLSQGAEGRIVNGYPAPEGKAPYIVGLFIRTDGSNSGA-VGAGTIIANDW 75
            |..|||.||..|         :.|||.||...|...||.|.|       |:|: :..|::|.:.|
  Rat    10 LGTVAAFPTEDN---------DDRIVGGYTCQEHSVPYQVSL-------NAGSHICGGSLITDQW 58

  Fly    76 ILTAAHCLTGDYVEIHYGSN--WGWNGAYRQTVRRDNFISHPD---WPSQGGRDIGLI--RTPHV 133
            :|:||||. ...:::..|.:  :...|| .|.:.....|.|||   |...  .||.||  ::| .
  Rat    59 VLSAAHCY-HPQLQVRLGEHNIYEIEGA-EQFIDAAKMILHPDYDKWTVD--NDIMLIKLKSP-A 118

  Fly   134 DFNGLINKIPLPSMNEQNDRYQDTWCVACGWG----GMDNGNLADWLQCVDVQIISNSECEQAYG 194
            ..|..::.||||    |......|.|:..|||    |.::.::   |||:|..::|:|.|.:||.
  Rat   119 TLNSKVSTIPLP----QYCPTAGTECLVSGWGVLKFGFESPSV---LQCLDAPVLSDSVCHKAYP 176

  Fly   195 SVASTDM-CTRHAD-GKSVCGGDSGGPLVTHDNARLVGVITFASVSCHDG-PSGYTRVSDYLEWI 256
            ...:.:| |....: ||..|..|||||:|.  |..:.|::::......:| |..||:|.:||.||
  Rat   177 RQITNNMFCLGFLEGGKDSCQYDSGGPVVC--NGEVQGIVSWGDGCALEGKPGVYTKVCNYLNWI 239

  Fly   257  256
              Rat   240  239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18180NP_648341.1 Tryp_SPc 36..259 CDD:238113 76/236 (32%)
Prss3bl1NP_001101326.1 Tryp_SPc 25..242 CDD:238113 76/236 (32%)

Return to query results.
Submit another query.