DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18179 and TPSAB1

DIOPT Version :9

Sequence 1:NP_648340.1 Gene:CG18179 / 39124 FlyBaseID:FBgn0036023 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_003285.2 Gene:TPSAB1 / 7177 HGNCID:12019 Length:275 Species:Homo sapiens


Alignment Length:292 Identity:90/292 - (30%)
Similarity:121/292 - (41%) Gaps:58/292 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLFLLTLSV--ALAVVAASPGFNRTSLLPQVTISEGAEGRIVNGYPAPEGKAPYIVGLLIRTDG 63
            :.|.||.|.|  :.|..|.:||    ..|.:|        .||.|..||..|.|:.|.|  |..|
Human     2 LNLLLLALPVLASRAYAAPAPG----QALQRV--------GIVGGQEAPRSKWPWQVSL--RVHG 52

  Fly    64 SNSAAVGAGTIIASDWILTAAHCLTTDYVEIHYGSNWGWNGAFRQSVRRDN------------FI 116
            ........|::|...|:||||||:..|..::         .|.|..:|..:            .|
Human    53 PYWMHFCGGSLIHPQWVLTAAHCVGPDVKDL---------AALRVQLREQHLYYQDQLLPVSRII 108

  Fly   117 SHPN-WPAEGGRDIGLIRTPS-VGFTDLINKVALPSFSEESDRFVDTWCVACGWGGMDNGNLAD- 178
            .||. :.|:.|.||.|:.... |..:..::.|.||..||.....:..|  ..|||.:||..... 
Human   109 VHPQFYTAQIGADIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCW--VTGWGDVDNDERLPP 171

  Fly   179 --WLQCMDVQIISNSECEQSYGTVAST---------DMCTRRTDGKSSCGGDSGGPLVTHDNARL 232
              .|:.:.|.|:.|..|:..|...|.|         ||.......:.||.||||||||...|...
Human   172 PFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGNTRRDSCQGDSGGPLVCKVNGTW 236

  Fly   233 V--GVITFGSVDC--HSGPSGYTRVTDYLGWI 260
            :  ||:::|. .|  .:.|..|||||.||.||
Human   237 LQAGVVSWGE-GCAQPNRPGIYTRVTYYLDWI 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18179NP_648340.1 Tryp_SPc 39..260 CDD:214473 77/250 (31%)
Tryp_SPc 40..263 CDD:238113 79/251 (31%)
TPSAB1NP_003285.2 Tryp_SPc 31..268 CDD:238113 79/251 (31%)
Tryp_SPc 31..267 CDD:214473 77/249 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.