DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18179 and ctrb1

DIOPT Version :9

Sequence 1:NP_648340.1 Gene:CG18179 / 39124 FlyBaseID:FBgn0036023 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_002944677.2 Gene:ctrb1 / 394984 XenbaseID:XB-GENE-977509 Length:263 Species:Xenopus tropicalis


Alignment Length:267 Identity:86/267 - (32%)
Similarity:124/267 - (46%) Gaps:26/267 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTLSVALAVVAASPGFNRTSLLPQVTISEGAEGRIVNGYPAPEGKAPYIVGLLIRTDGSNSAAVG 70
            |.|...||:.....|..:..:.|.||    ...|||||..|..|..|:.|.|    ..|.|....
 Frog     4 LWLVSCLALATTVYGCGQPQIAPVVT----GYARIVNGEEAVPGSWPWQVSL----QDSTSWHFC 60

  Fly    71 AGTIIASDWILTAAHCLTTDYVEIHYGS-NWGWNGAFRQSVRRDNFISHPNWPAEG-GRDIGLIR 133
            .|::|.::|::|||||..:...::..|. :.|.|....||:......:||.|.:.. ..||.||:
 Frog    61 GGSLINNEWVVTAAHCGVSTRDKVVLGEHDRGSNVEKIQSLAVAKVFTHPQWNSNTINNDISLIK 125

  Fly   134 --TPSV-GFTDLINKVALPSFSE--ESDRFVDTWCVACGWG--GMDNGNLADWLQCMDVQIISNS 191
              ||:| |.|  :..|.|.:..|  |..|.    ||..|||  ..:.....:.||...:.:::|.
 Frog   126 LATPAVIGAT--VAPVCLANIGEDYEGGRI----CVTSGWGKTRYNAFTTPNQLQQTALPLLTND 184

  Fly   192 ECEQSYGTVASTDMCTRRTDGKSSCGGDSGGPLV--THDNARLVGVITFGSVDCH-SGPSGYTRV 253
            :|:..:|...:..|......|.|||.||||||||  .:|...|||::::||..|. |.|:.|.||
 Frog   185 QCKSYWGNNITGTMICAGAAGSSSCMGDSGGPLVCQANDAWTLVGIVSWGSSMCSTSTPAVYARV 249

  Fly   254 TDYLGWI 260
            .....|:
 Frog   250 AVLRSWV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18179NP_648340.1 Tryp_SPc 39..260 CDD:214473 77/232 (33%)
Tryp_SPc 40..263 CDD:238113 77/233 (33%)
ctrb1XP_002944677.2 Tryp_SPc 33..256 CDD:214473 77/232 (33%)
Tryp_SPc 34..259 CDD:238113 77/233 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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