DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8329 and psh

DIOPT Version :10

Sequence 1:NP_648339.1 Gene:CG8329 / 39123 FlyBaseID:FBgn0036022 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:290 Identity:77/290 - (26%)
Similarity:117/290 - (40%) Gaps:65/290 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ATVCAHRNRNRTAHHGGGPKDI-IVNGYPAYEGKAPY--AVG-LRMNNGAVGGGSVIGNNWVLTA 73
            |.....:.|.|.....|....| ||.|||...|..|:  |:| :........|||:|.:.:||||
  Fly   121 AVAACKKIRERKQQRSGNQLVIHIVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFVLTA 185

  Fly    74 AHCLTTDSVTIHYGSNRAWNGQLQHTVNKNNFFR---------HPGYPNSAGHDIGLIR------ 123
            |||:.||:.|..:....|.|.:     |.::.::         ||.|..:..:||.::.      
  Fly   186 AHCVNTDANTPAFVRLGAVNIE-----NPDHSYQDIVIRSVKIHPQYVGNKYNDIAILELERDVV 245

  Fly   124 -----TPYVSFTNLINKVSLPKFSQKGERFENWWCVACGWG--GMANGGLADWLQCMDVQVISNG 181
                 .|....|:..:..|..||            ...|||  .:.....:..|....::::...
  Fly   246 ETDNIRPACLHTDATDPPSNSKF------------FVAGWGVLNVTTRARSKILLRAGLELVPLD 298

  Fly   182 ECARSY----GSV-----ASTDMCTRATDGKSV---CGGDSGGALVTHDNPIQVGVITFASI--- 231
            :|..||    ||:     ...|....|.|.|.:   |.|||||.|: |:..::.|:.|...:   
  Fly   299 QCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGGPLI-HELNVEDGMYTIMGVISS 362

  Fly   232 --GCKS-GPSGYTRVSDHLDWIREKSGIAY 258
              ||.: .|..|||||.:||:|   .||.:
  Fly   363 GFGCATVTPGLYTRVSSYLDFI---EGIVW 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8329NP_648339.1 Tryp_SPc 35..253 CDD:238113 70/260 (27%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 70/263 (27%)
Blue background indicates that the domain is not in the aligned region.

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