DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and CPR4

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_009995.1 Gene:CPR4 / 850433 SGDID:S000000665 Length:318 Species:Saccharomyces cerevisiae


Alignment Length:164 Identity:60/164 - (36%)
Similarity:88/164 - (53%) Gaps:14/164 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YLD-ISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGI--GTLGKPLH---YKGTKFHKIKR 76
            |.| :|...::|. :..||...|||||..||..|..|...:  |.....:|   |:.||.:|:..
Yeast    55 YFDPVSKSMKEAD-LTFELYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYP 118

  Fly    77 VFVVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFIS--AAGCE 139
            ...:|.|.|..:.|..  ::|||.||||||.|.|:....::||.:| |:||.|:|.|:  |.|.|
Yeast   119 NKYIQGGVVAPDVGPF--TVYGPKFDDENFYLKHDRPERLAMAYFG-PDSNTSEFIITTKADGNE 180

  Fly   140 NLNGTNVVVGRVLRGLG-IVAEMEQNCTDE-GDP 171
            .|:|.:||.|::..||. ::..::...||| |.|
Yeast   181 ELDGKSVVFGQITSGLDQLMDAIQYTETDEYGKP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 60/164 (37%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
CPR4NP_009995.1 cyclophilin 67..219 CDD:238194 56/152 (37%)
Blue background indicates that the domain is not in the aligned region.

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