DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and ROC4

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001154684.1 Gene:ROC4 / 825376 AraportID:AT3G62030 Length:313 Species:Arabidopsis thaliana


Alignment Length:183 Identity:83/183 - (45%)
Similarity:109/183 - (59%) Gaps:10/183 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EERKLLRAVKSTNPLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHY 66
            ||..:....|.||. ||.|:.||.|.|||:::.|..:|||||.||||||||||       |...|
plant   136 EEEVIEPQAKVTNK-VYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGE-------KKYGY 192

  Fly    67 KGTKFHKIKRVFVVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQF 131
            ||:.||:|.:.|::|.||..:.:|:.|.||||..|:||||.|.|...|::||||.| ||:|.|||
plant   193 KGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAG-PNTNGSQF 256

  Fly   132 FISAAGCENLNGTNVVVGRVLRGLGIVAEMEQNCTDEGD-PTAPIVIRDCGEI 183
            ||.......|:..:||.|:|:.|:.:|..:|...|...| |.....|..|||:
plant   257 FICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGEL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 75/166 (45%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
ROC4NP_001154684.1 cyclophilin_ABH_like 149..307 CDD:238907 75/166 (45%)
Blue background indicates that the domain is not in the aligned region.

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