DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8336 and AT3G22920

DIOPT Version :9

Sequence 1:NP_001261636.1 Gene:CG8336 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_188932.1 Gene:AT3G22920 / 821864 AraportID:AT3G22920 Length:232 Species:Arabidopsis thaliana


Alignment Length:176 Identity:73/176 - (41%)
Similarity:108/176 - (61%) Gaps:15/176 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NPLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVF 78
            ||.|:.|:::..:.|||::|||..|:.|:||||||.|||||.|||..|||:||||:.|..|....
plant     3 NPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDL 67

  Fly    79 VVQSGDVVKNDGSSGESIYGPVFDDENFELSHNE-EGVVSMANYGKPNSNNSQFFISAA--GCEN 140
            :...||::    ...|.|:....|||.|.|:|.: .|::|||     :||.|||.|...  |.: 
plant    68 MWCGGDII----FENEPIHSEELDDEYFILNHEDGPGIISMA-----DSNGSQFQIHMKDYGLQ- 122

  Fly   141 LNGTNVVVGRVLRGLGIVAEMEQN--CTDEGDPTAPIVIRDCGEIA 184
            ::|.:||:|:|:.||.::..:|:.  .|....|:.|:||.||||::
plant   123 VDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIADCGELS 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8336NP_001261636.1 cyclophilin 15..181 CDD:294131 69/170 (41%)
TPR repeat 285..315 CDD:276809
TPR_19 300..369 CDD:291240
TPR_1 320..353 CDD:278916
TPR repeat 320..346 CDD:276809
AT3G22920NP_188932.1 cyclophilin 1..168 CDD:381853 73/174 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1403619at2759
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11071
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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