DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp40 and ppil4

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001122114.1 Gene:ppil4 / 733774 XenbaseID:XB-GENE-975086 Length:471 Species:Xenopus tropicalis


Alignment Length:347 Identity:75/347 - (21%)
Similarity:135/347 - (38%) Gaps:106/347 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVFVVQSGDVVKNDGSSG 93
            |.::|:|..:..|:...||..||          |..:|.....|.:::.|::|:||.. ..|..|
 Frog    10 GDIVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHSVQKDFIIQTGDPT-GTGRGG 63

  Fly    94 ESIYGPVFDDEN--FE------LSHNEEGVVSMANYGKPNSNNSQFFISAAGCEN---LNGTNVV 147
            ||:|..::.|:.  ||      :.|.:.|.|||.|.|. :.:.|||.|:..  ||   |:|.:.|
 Frog    64 ESLYCKIYGDQAKFFESEKVPRIKHKKFGTVSMVNNGN-DQHGSQFLITTG--ENLDYLDGVHTV 125

  Fly   148 VGRVLRGLGIVAEMEQNCTDE--------------------GDPTAPIV----------IRDCGE 182
            .|.|..|:.:|.::.:...|:                    .||:...:          ..|.|.
 Frog   126 FGEVTEGMNVVKKINEAFVDKEFVPYQDIRINHTVILDDPFDDPSGLTIPDSSPGPTKEQLDSGR 190

  Fly   183 IAHNEDWGIECND--ETTDKLPAYPQDWPRKLDKFTGDGAVELL-----TGIRQSGNHFYQLGRY 240
            |..:||   .|:|  :|.:::    ::...:.|..|....:|::     ..||...|..:..   
 Frog   191 IGADED---ICDDKGKTAEEV----EEMIAEKDAKTQAVLLEMVGDIPDADIRPPENVLFVC--- 245

  Fly   241 HEARAKYRKANRYYHYLSRQFGWQQLNPLKKHLVDEDLLKVDGFSVVNNINAAAVDLKVGNYTSA 305
                                    :|||:   ..||||..:  ||...:|.:..:   :.::.:.
 Frog   246 ------------------------KLNPV---TTDEDLEII--FSRFGSIKSCEI---IRDWKTG 278

  Fly   306 REVCNEAIRLDPK--CSKAFYR 325
            ..:|...|..:.:  |.||:::
 Frog   279 ESLCYAFIEFEKEQDCEKAYFK 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 47/192 (24%)
TPR 231..>370 CDD:440225 16/97 (16%)
TPR repeat 285..315 CDD:276809 4/29 (14%)
TPR repeat 320..346 CDD:276809 2/6 (33%)
ppil4NP_001122114.1 cyclophilin_RRM 4..169 CDD:238902 44/172 (26%)
RRM_PPIL4 237..319 CDD:409681 16/99 (16%)
U2AF_lg 368..>468 CDD:273727
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.