DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp40 and ZC250.5

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001123073.1 Gene:ZC250.5 / 6418817 WormBaseID:WBGene00045306 Length:204 Species:Caenorhabditis elegans


Alignment Length:195 Identity:49/195 - (25%)
Similarity:92/195 - (47%) Gaps:20/195 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ERKLLRAVK--STNPLVYLDISIGKEDA---GRMIIELRKDVVPKTAENFRALCTGECGIGTLGK 62
            ::|.|..|.  :.|.:||.|  ||.|..   ||:||::.:.:.....|.|.....||....:.||
 Worm    16 DKKKLEWVNYCNMNQMVYFD--IGFETGVPIGRVIIQMNEALKKNLTELFVKTARGEFVHPSCGK 78

  Fly    63 PLHYKGTKFHKIK-RVFVVQSGDVVKNDGSSG-ESIYGPVFDDENFELS-HNEEG-VVSMANYGK 123
            .:.|.||..|:|. ...::..|||:..:|... ..:...:|.:.||..: .|..| |:.:.:...
 Worm    79 KIEYTGTILHQISTSKNMIMGGDVLNGNGCGRCAPVSRKLFQENNFSSTVQNTRGKVILLPSDTN 143

  Fly   124 PNSNNSQFFISAAGCENLNGTNVV----VGRVLRGLGIVAE-MEQNCTDEGDPTAPIVIRDCGEI 183
            |...:|.|::..    :.:|.:||    :|.|:.|:.|:.. :::..::.|.|...:::.:||.:
 Worm   144 PTVFSSLFYVLL----DKSGPSVVDGCPIGDVIEGIEILETIVKEYGSENGRPGKKLIVHNCGHL 204

  Fly   184  183
             Worm   205  204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 43/177 (24%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
ZC250.5NP_001123073.1 cyclophilin 29..204 CDD:469651 46/180 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.