DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and ppib

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001017063.1 Gene:ppib / 549817 XenbaseID:XB-GENE-855964 Length:208 Species:Xenopus tropicalis


Alignment Length:191 Identity:86/191 - (45%)
Similarity:115/191 - (60%) Gaps:12/191 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EERKLLRAVKSTNPLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHY 66
            :|:|  :..|.|:. ||.||.||.||.||::|.|....||||.|||..|.|||.|.|       |
 Frog    26 DEKK--KGPKVTHK-VYFDIKIGDEDVGRVVIGLFGKTVPKTVENFVTLATGEKGFG-------Y 80

  Fly    67 KGTKFHKIKRVFVVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQF 131
            ||:|||::.:.|::|.||..:.||:.|:||||..|.||||:|.|.....|||||.|| ::|.|||
 Frog    81 KGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLRHYGPNWVSMANAGK-DTNGSQF 144

  Fly   132 FISAAGCENLNGTNVVVGRVLRGLGIVAEMEQNCTDEGD-PTAPIVIRDCGEIAHNEDWGI 191
            ||:......|:|.:||.|::|.|..:|.::|...||..| |...:||.|||.|...:.:.|
 Frog   145 FITTVKTPWLDGKHVVFGKILEGKDVVEKIESTKTDGRDKPLKDVVIADCGTIEVEKPFAI 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 78/166 (47%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
ppibNP_001017063.1 cyclophilin_ABH_like 36..195 CDD:238907 78/167 (47%)
Blue background indicates that the domain is not in the aligned region.

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