DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp40 and ppih

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_957499.1 Gene:ppih / 494165 ZFINID:ZDB-GENE-040625-127 Length:181 Species:Danio rerio


Alignment Length:149 Identity:72/149 - (48%)
Similarity:100/149 - (67%) Gaps:3/149 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NPLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVF 78
            ||:|:.|:|||.::.|||.|||..|:|||||||||..||||  ....|.|:.|||..||::.:.|
Zfish    10 NPIVFFDVSIGGQEVGRMKIELFADIVPKTAENFRQFCTGE--FKKDGVPVGYKGCTFHRVIKDF 72

  Fly    79 VVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNG 143
            ::|.||.|..||:...|||...|.||||.:.|:..|::||||.| |.:|..||||:...|:.|:|
Zfish    73 MIQGGDFVNGDGTGICSIYRGPFADENFRMKHSGPGLLSMANSG-PGTNGCQFFITCTKCDWLDG 136

  Fly   144 TNVVVGRVLRGLGIVAEME 162
            .:||.|:|:.||.::.::|
Zfish   137 KHVVFGKVVDGLLVMRKIE 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 71/148 (48%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
ppihNP_957499.1 cyclophilin_ABH_like 11..175 CDD:238907 71/148 (48%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.