DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and ppig

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001001234.1 Gene:ppig / 407915 XenbaseID:XB-GENE-5805534 Length:736 Species:Xenopus tropicalis


Alignment Length:176 Identity:83/176 - (47%)
Similarity:116/176 - (65%) Gaps:3/176 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VKSTNPLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIG-TLGKPLHYKGTKFHK 73
            ||......:.||:|....|||::.||..||.|||.||||:|||||.||| :..||||||...||:
 Frog     3 VKVQRTRCFFDIAINNAPAGRVVFELFSDVCPKTCENFRSLCTGERGIGKSTQKPLHYKNCMFHR 67

  Fly    74 IKRVFVVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGC 138
            :.:.|::|.||..:.:|..||||||..|:||||.:.||:|.::||||.|| ::|.|||||:....
 Frog    68 VVKDFMIQGGDFSEGNGRGGESIYGGFFEDENFSIQHNKEFLLSMANRGK-DTNGSQFFITTKPT 131

  Fly   139 ENLNGTNVVVGRVLRGLGIVAEMEQNCTD-EGDPTAPIVIRDCGEI 183
            .:|:|.:||.|:|:.|..:|.|:|...|| ...|:..:.|::|||:
 Frog   132 PHLDGLHVVFGQVISGQDLVREIENQKTDASSKPSVDVSIQNCGEL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 78/167 (47%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
ppigNP_001001234.1 cyclophilin_ABH_like 9..175 CDD:238907 78/166 (47%)
PTZ00121 <282..717 CDD:173412
Blue background indicates that the domain is not in the aligned region.

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