DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and ppig

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_998629.1 Gene:ppig / 406773 ZFINID:ZDB-GENE-040426-2822 Length:687 Species:Danio rerio


Alignment Length:223 Identity:90/223 - (40%)
Similarity:129/223 - (57%) Gaps:22/223 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VKSTNPLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIG-TLGKPLHYKGTKFHK 73
            ||:..|..:.||.|....|||::|||..||.|||.||||.|||||.|:| |..||||||||.||:
Zfish     3 VKAQRPRCFFDIGISNVPAGRVVIELFSDVCPKTCENFRCLCTGEKGVGKTTQKPLHYKGTPFHR 67

  Fly    74 IKRVFVVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGC 138
            |.:.|::|.||..:.:|..||||||..|:|.:|.:.|.:|.::||||.|| ::|.|||||:....
Zfish    68 IVKDFMIQGGDFSEGNGRGGESIYGGFFEDGSFSMKHTKEFLLSMANRGK-DTNGSQFFITTKPT 131

  Fly   139 ENLNGTNVVVGRVLRGLGIVAEMEQNCTDEGD-PTAPIVIRDCGEI----------------AHN 186
            .:|:|.:||.|:|:.|..::..:|...||... |.|.:.:.:|||:                :.:
Zfish   132 PHLDGIHVVFGQVITGQDVIRMIESQKTDTNSRPYAEVKVLNCGELVPKSKAKKEKKKHQSSSES 196

  Fly   187 EDWGIECNDETTDKLPAYPQDWPRKLDK 214
            ||   ..:|.::|...:..:...||..|
Zfish   197 ED---SSSDSSSDSEESEKEKKRRKKHK 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 78/167 (47%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
ppigNP_998629.1 cyclophilin 8..175 CDD:469651 78/167 (47%)
PRK12678 430..>644 CDD:237171
Blue background indicates that the domain is not in the aligned region.

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