DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and ppib

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_998184.1 Gene:ppib / 406292 ZFINID:ZDB-GENE-040426-1955 Length:216 Species:Danio rerio


Alignment Length:168 Identity:80/168 - (47%)
Similarity:106/168 - (63%) Gaps:9/168 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVFVVQ 81
            ||.||.||.|||||::|.|....||||.|||..|.|||.|.|       |||:|||::.:.|::|
Zfish    46 VYFDIKIGDEDAGRIVIGLFGKTVPKTTENFLQLATGEKGFG-------YKGSKFHRVIKDFMIQ 103

  Fly    82 SGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNGTNV 146
            .||..:.||:.|:||||..|.||||:|.|...|.:||||.|| ::|.|||||:......|:|.:|
Zfish   104 GGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWLSMANAGK-DTNGSQFFITTVQTPWLDGKHV 167

  Fly   147 VVGRVLRGLGIVAEMEQNCTDEGD-PTAPIVIRDCGEI 183
            |.|::|.|:.:|.::|...||..| |...:.|.|.|:|
Zfish   168 VFGKILEGMDVVRKIEATKTDGRDKPLKDVSIHDSGKI 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 78/164 (48%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
ppibNP_998184.1 cyclophilin_ABH_like 45..203 CDD:238907 78/164 (48%)
Blue background indicates that the domain is not in the aligned region.

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