DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and CG3511

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster


Alignment Length:133 Identity:52/133 - (39%)
Similarity:71/133 - (53%) Gaps:16/133 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVFVVQSGDVVKNDGSSGESIYGPVFDDE 104
            ||||.|||   |..       .|..:|.|..||::.:.|:||:||.. ..|:.|:||:|..|.||
  Fly   502 VPKTVENF---CVH-------AKNGYYNGHIFHRVIKGFMVQTGDPT-GTGTGGKSIWGSDFKDE 555

  Fly   105 NF-ELSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNGTNVVVGRVLRGLGIVAEMEQNCTDE 168
            .. .|.|:....|||||.| ||:|.|||||:......|:..:.|.|||.||:.:|..:   |..:
  Fly   556 FVPSLKHDRPYTVSMANAG-PNTNGSQFFITVLPTPWLDNKHTVFGRVYRGMEVVLNI---CNSK 616

  Fly   169 GDP 171
            .:|
  Fly   617 ANP 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 52/133 (39%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 52/133 (39%)
Blue background indicates that the domain is not in the aligned region.

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