DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8336 and CG3492

DIOPT Version :9

Sequence 1:NP_001261636.1 Gene:CG8336 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_611914.1 Gene:CG3492 / 37902 FlyBaseID:FBgn0035007 Length:404 Species:Drosophila melanogaster


Alignment Length:204 Identity:46/204 - (22%)
Similarity:70/204 - (34%) Gaps:66/204 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KLLRAVKSTNPLVYLDISIGK-EDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKG 68
            ||||      |.:||||.:.: ...||:||:|..:..|:....|..:||..              
  Fly   242 KLLR------PQIYLDIEVREARIQGRLIIQLFTEACPQVVLEFMRICTQN-------------- 286

  Fly    69 TKFHKIKRVFVVQSGDVVKNDG-----SSGESIYGPVFDDENFELSHNEE--------GVVSM-A 119
                        .|..:|.|..     ..|.....|....|...:.|:.|        |::|. :
  Fly   287 ------------NSSAIVFNRALAPIWMEGRLAMDPQRSTELTNIEHDFEVLNHGVDAGILSFPS 339

  Fly   120 NYGKPNSNNS-QFFISAAGCENLNGTNVVVGRVLRGLGIVAE---------MEQNCTDEGDPTAP 174
            .|.:.|:..: .|.||......|||..:..|:|.:|:.::..         |..|.         
  Fly   340 RYVRGNARTAVNFTISFKPLSILNGRRIAFGKVRKGMQLLERIQVAVGHLPMSHNL--------- 395

  Fly   175 IVIRDCGEI 183
            |.:.|||.|
  Fly   396 ISLTDCGVI 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8336NP_001261636.1 cyclophilin 15..181 CDD:294131 39/190 (21%)
TPR repeat 285..315 CDD:276809
TPR_19 300..369 CDD:291240
TPR_1 320..353 CDD:278916
TPR repeat 320..346 CDD:276809
CG3492NP_611914.1 cyclophilin 249..388 CDD:294131 34/164 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11071
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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