DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and cyp4

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_596532.1 Gene:cyp4 / 2541395 PomBaseID:SPBP8B7.25 Length:201 Species:Schizosaccharomyces pombe


Alignment Length:195 Identity:86/195 - (44%)
Similarity:114/195 - (58%) Gaps:15/195 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RAVKSTNPLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFH 72
            |..|.|: .||.|:..|.|..||:.|.|....|||||||||||.|||.|.|       |:|:.||
pombe    21 RGPKVTD-TVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFG-------YEGSIFH 77

  Fly    73 KIKRVFVVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAG 137
            ::...|::|.||:.|.||:.|:||||..|.||||:|||...|::||||.| |:||.|||||:...
pombe    78 RVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAG-PDSNGSQFFITTVK 141

  Fly   138 CENLNGTNVVVGRVLRGLGIVAEMEQNCTDEGD-PTAPIVIRDCGEIAHNEDWGIECNDETTDKL 201
            ...|:|.:||.|.||.|..||.::.:..||..| |...:.|...|:::..     ...|:.||:|
pombe   142 TPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQLSQE-----NVEDDGTDEL 201

  Fly   202  201
            pombe   202  201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 78/166 (47%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
cyp4NP_596532.1 cyclophilin 27..186 CDD:469651 78/167 (47%)
Blue background indicates that the domain is not in the aligned region.

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