DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8336 and CG30350

DIOPT Version :9

Sequence 1:NP_001261636.1 Gene:CG8336 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_724715.1 Gene:CG30350 / 246556 FlyBaseID:FBgn0050350 Length:369 Species:Drosophila melanogaster


Alignment Length:187 Identity:43/187 - (22%)
Similarity:78/187 - (41%) Gaps:32/187 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EERKLLRAVKSTNPLVYLDISIGKEDA---GRMIIELRKDVVPKTAENFRALCTGECGIGTLGKP 63
            |.|:|.|      |.:|.|:.:  :||   ||.:::|..:..|.........|.  |.       
  Fly   206 ELRRLFR------PRIYFDLYL--KDARPLGRFVVQLYTEAAPLVVLQLIKSCM--CN------- 253

  Fly    64 LHYKGTKFHKIKRVF--VVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEG-VVSMAN-YGKP 124
               :.:|| .:||:|  :....|::.   ||...::.|:..|... :.|.... |:|.:. |...
  Fly   254 ---QHSKF-MVKRLFPNLWLETDLML---SSDSLLHQPLEYDAKV-IDHGASSYVLSFSKAYVTG 310

  Fly   125 NSNNSQFFISAAGCENLNGTNVVVGRVLRGLGIVAEMEQNCTDEGDPTAPIVIRDCG 181
            .:::..|.||......:||:.|..||:::|..|...::...|..|..:..::...||
  Fly   311 FTHHLSFAISFKPLTVVNGSRVGFGRIVKGSKICECIQSYGTKNGKLSRGLLFTSCG 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8336NP_001261636.1 cyclophilin 15..181 CDD:294131 37/172 (22%)
TPR repeat 285..315 CDD:276809
TPR_19 300..369 CDD:291240
TPR_1 320..353 CDD:278916
TPR repeat 320..346 CDD:276809
CG30350NP_724715.1 KIAA1430 60..155 CDD:290590
cyclophilin 212..369 CDD:294131 40/181 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.