DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8336 and cyn-12

DIOPT Version :9

Sequence 1:NP_001261636.1 Gene:CG8336 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_501118.1 Gene:cyn-12 / 191627 WormBaseID:WBGene00000888 Length:169 Species:Caenorhabditis elegans


Alignment Length:195 Identity:69/195 - (35%)
Similarity:94/195 - (48%) Gaps:42/195 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVFV 79
            |.|.||.::||     :.:||..:..|:|.:||          ..|.|..:|.||.||:|...|:
 Worm    10 PYVILDTTMGK-----IALELYWNHAPRTCQNF----------SQLAKRNYYNGTIFHRIIADFM 59

  Fly    80 VQSGDVVKNDGSSGESIYGPVFDDENFE-LSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNG 143
            :|.||.. ..|..|.||||..|.||..| |.|...|::||||.| ||:|.|||||:.|..::|:|
 Worm    60 IQGGDPT-GTGRGGASIYGDKFSDEIDERLKHTGAGILSMANAG-PNTNGSQFFITLAPTQHLDG 122

  Fly   144 TNVVVGRVLRGLGIVAEMEQNCTDEGD-PTAPIVIRDCGEIAHNEDWGIECNDETTDKLPAYPQD 207
            .:.:.|||..|:.::|.|.:..||..| |...|.|                       |.|||.:
 Worm   123 KHTIFGRVAAGMKVIANMGRVDTDNHDRPKIEIRI-----------------------LKAYPSE 164

  Fly   208  207
             Worm   165  164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8336NP_001261636.1 cyclophilin 15..181 CDD:294131 65/167 (39%)
TPR repeat 285..315 CDD:276809
TPR_19 300..369 CDD:291240
TPR_1 320..353 CDD:278916
TPR repeat 320..346 CDD:276809
cyn-12NP_501118.1 cyclophilin_SpCYP2_like 13..159 CDD:238903 63/185 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.