DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and cyn-13

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001255925.1 Gene:cyn-13 / 178487 WormBaseID:WBGene00000889 Length:331 Species:Caenorhabditis elegans


Alignment Length:169 Identity:86/169 - (50%)
Similarity:106/169 - (62%) Gaps:8/169 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVFV 79
            |.|||.:.||....||::||||.||.||||||||.|||||.|.|       |:|:.||:|...|:
 Worm   139 PRVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERGFG-------YEGSIFHRIIPKFM 196

  Fly    80 VQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNGT 144
            :|.||..|.||:.|:||||..||||||.|.|...|.|||||.| .|:|.|||||.....:.|:|.
 Worm   197 LQGGDFTKGDGTGGKSIYGTKFDDENFTLRHTMPGTVSMANCG-ANTNGSQFFICTEKTDWLDGK 260

  Fly   145 NVVVGRVLRGLGIVAEMEQNCTDEGDPTAPIVIRDCGEI 183
            :||.|.|:.|:.||.::||..|..|.|...:.|.:.|||
 Worm   261 HVVFGHVVEGMNIVRQVEQQGTPSGKPQMVVKIVESGEI 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 83/165 (50%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
cyn-13NP_001255925.1 RRM_PPIE 13..87 CDD:409783
cyclophilin_ABH_like 139..297 CDD:238907 83/165 (50%)
Blue background indicates that the domain is not in the aligned region.

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