DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and cyn-6

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_497257.1 Gene:cyn-6 / 175231 WormBaseID:WBGene00000882 Length:201 Species:Caenorhabditis elegans


Alignment Length:168 Identity:70/168 - (41%)
Similarity:100/168 - (59%) Gaps:9/168 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVFVVQ 81
            |:.|:.||....|:::|.|..:|||||.:||..|.....|.|       |.|:|||::...|::|
 Worm    28 VFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEG-------YVGSKFHRVIENFMIQ 85

  Fly    82 SGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNGTNV 146
            .||..:.||:.|.||||..|:||||:|.|...|.:||||.|: ::|.|||||:.|....|:|.:|
 Worm    86 GGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGE-DTNGSQFFITTAKTSWLDGKHV 149

  Fly   147 VVGRVLRGLGIVAEMEQNCTDEGD-PTAPIVIRDCGEI 183
            |.|::|.|:.:|.|:|......|| |...:||.:.|.|
 Worm   150 VFGKILEGMDVVREIEATPKGAGDRPIEDVVIANAGHI 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 68/164 (41%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
cyn-6NP_497257.1 cyclophilin 26..185 CDD:469651 68/164 (41%)
Blue background indicates that the domain is not in the aligned region.

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