DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8336 and cyn-16

DIOPT Version :9

Sequence 1:NP_001261636.1 Gene:CG8336 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_496562.3 Gene:cyn-16 / 174843 WormBaseID:WBGene00000892 Length:483 Species:Caenorhabditis elegans


Alignment Length:418 Identity:99/418 - (23%)
Similarity:157/418 - (37%) Gaps:127/418 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TNPLVYLDISIGK----EDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHK 73
            :|..:...|:.||    ..||.:.|||.....|....||..||...          :||||.||:
 Worm     2 SNQYINEPITTGKVTLETTAGDIEIELWTKEAPLACRNFIQLCMEN----------YYKGTVFHR 56

  Fly    74 IKRVFVVQSGDVVKNDGSSGESIYGPVFDDE-NFELSHNEEGVVSMANYGKPNSNNSQFF--ISA 135
            :.:.|::|.||.... |:.||||||..|.|| :..|..|..|:|.|||.|: :.|.||||  |..
 Worm    57 LVKNFILQGGDPTAT-GTGGESIYGKPFKDEIHQRLKFNRRGIVGMANAGR-DDNGSQFFFTIGD 119

  Fly   136 AGCENLNGTNVVVGRV----LRGLGIVAEMEQNCTDEGDPTAPIVIRDCGEIAHNEDWGIECNDE 196
            .|...|:..:.:.|:|    |..:..:.|:|    .|||  .|:....                 
 Worm   120 RGAPELDKKHTIFGKVTGPTLFNMLKITEVE----TEGD--RPVTFYK----------------- 161

  Fly   197 TTDKLPAYPQDWPRKLDKFTGDGAVELLTGIRQSGNHFYQLGRYHEARAKYRKANRYYHYLSRQF 261
                                       :||.|...|.|..| :..|.|.|.:...|...      
 Worm   162 ---------------------------ITGARIDNNPFDDL-KPREKRKKEKSERRKEP------ 192

  Fly   262 GWQQLNPLKKHLV--------DEDLLKV----------------DGFSVVNNINAAAVDLKVGNY 302
              :.:...|.:|:        ||..|.|                |..:|..:..||....::.||
 Worm   193 --KVVETKKTNLLSFGDEVEEDEQELAVFNKKTANKPKSAHDAHDNDTVGLSKQAAVTRDEMSNY 255

  Fly   303 ------TSAREVCNEAIRLDPKCSKAFYRRAQAQRG--LRNYEEAINDLKTAHNLLPENKQILNE 359
                  |...|....:|| :....|:..|:.:.:.|  ..:||:.|.|.:.|     :.::.:::
 Worm   256 CPEDDDTVKDESSISSIR-EKLMKKSQKRKLEEKAGGEDEDYEKMIEDERNA-----KERETIDK 314

  Fly   360 LNS-TKQLLAQYN------RQQRNALKN 380
            :|| .|.:..:|.      ::::.|:|:
 Worm   315 MNSELKDMQKEYMKALRPVKEKKKAVKD 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8336NP_001261636.1 cyclophilin 15..181 CDD:294131 58/176 (33%)
TPR repeat 285..315 CDD:276809 8/35 (23%)
TPR_19 300..369 CDD:291240 17/77 (22%)
TPR_1 320..353 CDD:278916 8/34 (24%)
TPR repeat 320..346 CDD:276809 7/27 (26%)
cyn-16NP_496562.3 cyclophilin_CeCYP16-like 8..175 CDD:238906 63/228 (28%)
PRK14906 258..>353 CDD:184899 18/91 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.