DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and cyn-10

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001021890.1 Gene:cyn-10 / 174132 WormBaseID:WBGene00000886 Length:161 Species:Caenorhabditis elegans


Alignment Length:163 Identity:60/163 - (36%)
Similarity:82/163 - (50%) Gaps:29/163 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 AGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVFVVQSGDVVKNDGSS 92
            :|.:.|||..|..||..|||.|||..:          :|.|..||:..:.|:||:||.. :.|..
 Worm     9 SGDIKIELYVDDAPKACENFLALCASD----------YYNGCIFHRNIKDFMVQTGDPT-HSGKG 62

  Fly    93 GESIYGPVFDDENFE-LSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNGTNVVVGRVLRGLG 156
            ||||:|..|:||... |.|:..|.|||||.| |:||.|||||:.|...:|:....:.|:|:.|..
 Worm    63 GESIWGGPFEDEFVSALKHDSRGCVSMANNG-PDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFD 126

  Fly   157 IVAEME----------------QNCTDEGDPTA 173
            .:.|:|                ||.|...:|.|
 Worm   127 TLEEIETIKVDNKYRPLVQQKIQNVTIHANPMA 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 60/163 (37%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
cyn-10NP_001021890.1 Cyclophilin_PPIL3_like 1..153 CDD:238909 57/155 (37%)
Blue background indicates that the domain is not in the aligned region.

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