DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and LOC1271778

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:XP_310632.6 Gene:LOC1271778 / 1271778 VectorBaseID:AGAMI1_007047 Length:227 Species:Anopheles gambiae


Alignment Length:175 Identity:78/175 - (44%)
Similarity:112/175 - (64%) Gaps:8/175 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AVKSTNPLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHK 73
            |.|.:.|..:.|:::..:..||::||||.||||||:||||||||||.|.|       |||:.||:
Mosquito    61 ASKMSLPRCFFDMTVDNQPLGRIVIELRPDVVPKTSENFRALCTGEKGFG-------YKGSIFHR 118

  Fly    74 IKRVFVVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGC 138
            :...|:.|.||...::|:.|:||||..|:||||.|.|...|::||||.| ||:|.|||||:....
Mosquito   119 VIPNFMCQGGDFQNHNGTGGKSIYGNKFEDENFILKHTGPGILSMANAG-PNTNGSQFFITTVKT 182

  Fly   139 ENLNGTNVVVGRVLRGLGIVAEMEQNCTDEGDPTAPIVIRDCGEI 183
            ..||..:||.|.|:.|:.:|.::|...:..|.|:..|.:.:||::
Mosquito   183 SWLNDRHVVFGSVVEGMDVVRKIESFGSHSGKPSKQITVANCGQL 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 74/165 (45%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
LOC1271778XP_310632.6 None
Blue background indicates that the domain is not in the aligned region.

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