DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and LOC100488106

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:XP_004912407.1 Gene:LOC100488106 / 100488106 XenbaseID:XB-GENE-29079075 Length:147 Species:Xenopus tropicalis


Alignment Length:174 Identity:75/174 - (43%)
Similarity:97/174 - (55%) Gaps:28/174 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GRMIIELRKDVVPKTAENFRALCTGECGIGTLGKPLHYKGTKFHKIKRVFVVQSGDVVKNDGSSG 93
            |.:|:|||.|||||||||||||||.|.|.|       ||.:.||:|...|:.|.||...::|:.|
 Frog     2 GLIIMELRSDVVPKTAENFRALCTHEKGFG-------YKNSGFHRIIPEFMCQGGDFTNHNGTGG 59

  Fly    94 ESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNGTNVVVGRVLRGLGIV 158
            :||||..|.||||:|.|...|::||||.| .|:|.|||||..|....|:|.:||.|.|:.|:.:|
 Frog    60 KSIYGNKFADENFQLRHTGPGILSMANAG-ANTNGSQFFICTAKTSWLDGKHVVFGTVIDGMDVV 123

  Fly   159 AEMEQNCTDEGDPTAPIVIRDCGEIAHNEDWGIECNDETTDKLP 202
            ...|:..:..|:        ||            |..|...:||
 Frog   124 KNTEKLGSQSGN--------DC------------CLRELATRLP 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 70/151 (46%)
TPR 231..>370 CDD:440225
TPR repeat 285..315 CDD:276809
TPR repeat 320..346 CDD:276809
LOC100488106XP_004912407.1 cyclophilin 2..134 CDD:469651 68/139 (49%)
Blue background indicates that the domain is not in the aligned region.

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