DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp40 and Nktr

DIOPT Version :10

Sequence 1:NP_648338.1 Gene:Cyp40 / 39121 FlyBaseID:FBgn0036020 Length:383 Species:Drosophila melanogaster
Sequence 2:XP_038938667.1 Gene:Nktr / 100364165 RGDID:2321593 Length:1516 Species:Rattus norvegicus


Alignment Length:311 Identity:99/311 - (31%)
Similarity:155/311 - (49%) Gaps:57/311 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PLVYLDISIGKEDAGRMIIELRKDVVPKTAENFRALCTGECGIG-TLGKPLHYKGTKFHKIKRVF 78
            |..:.||.|.:|..||::.:|..|:.|||.:||..||:||.|:| |.||.|.|||:.||::.:.|
  Rat    66 PQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNF 130

  Fly    79 VVQSGDVVKNDGSSGESIYGPVFDDENFELSHNEEGVVSMANYGKPNSNNSQFFISAAGCENLNG 143
            ::|.||..:.:|..||||||..|.||||.|.|:...::||||.|| ::|.|||||:.....:|:|
  Rat   131 MIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGK-HTNGSQFFITTKPAPHLDG 194

  Fly   144 TNVVVGRVLRGLGIVAEMEQNCTDEGD-PTAPIVIRDCGEIA----------------HNEDWGI 191
            .:||.|.|:.|..::.::|...||... |.|.:.:.|||.:|                |:||...
  Rat   195 VHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLATKLTKDVFEKKRKKPTHSEDSDS 259

  Fly   192 ECNDETTDKLPAYPQDWPRKLDKFTGDGAVELLTGIRQSGNHFYQLGRYHEARAKYRKANRYYHY 256
            ..|..::              .:.:.:..|| ...||:         |.|:.|.|.|...:....
  Rat   260 SSNSSSS--------------SESSSESEVE-RERIRR---------RRHKRRPKVRHTKKRRKE 300

  Fly   257 LSRQFGWQQLNPLKKHLVDEDLLKVDGFSVVNNINAAAVDLKVGNYTSARE 307
            :|   |.::|.  :|..|..     :|:|..:::|    :.:.|:..:.||
  Rat   301 MS---GSEELR--RKRTVSP-----EGYSERSDVN----EKRSGDSNTKRE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp40NP_648338.1 cyclophilin 15..181 CDD:469651 72/167 (43%)
TPR 231..>370 CDD:440225 16/77 (21%)
TPR repeat 285..315 CDD:276809 5/23 (22%)
TPR repeat 320..346 CDD:276809
NktrXP_038938667.1 cyclophilin 66..233 CDD:469651 72/167 (43%)
Blue background indicates that the domain is not in the aligned region.

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