Sequence 1: | NP_648337.1 | Gene: | CG3335 / 39119 | FlyBaseID: | FBgn0036018 | Length: | 918 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014671.1 | Gene: | Rb97D / 43231 | FlyBaseID: | FBgn0004903 | Length: | 471 | Species: | Drosophila melanogaster |
Alignment Length: | 284 | Identity: | 61/284 - (21%) |
---|---|---|---|
Similarity: | 114/284 - (40%) | Gaps: | 77/284 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 655 IVNDAKPDEEDS-------RAEDADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVEIAK 712
Fly 713 RRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTH-IDGNPVELKRSDRVLKTQDNDGAQRRL 776
Fly 777 ASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDYMSKAEA 841
Fly 842 KRAFDALSASTHLYGRRLVLEWSANDDNQDVEE--LRKRTAAKFDGSQAATAAKRSRKSFFDVE- 903
Fly 904 ----------GSVQPNQDDDEEEE 917 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3335 | NP_648337.1 | RRM1_RBM19 | 2..77 | CDD:241008 | |
RRM_SF | 250..314 | CDD:302621 | |||
RRM3_RBM19 | 362..440 | CDD:241011 | |||
RRM4_RBM19 | 552..623 | CDD:241013 | |||
RRM | <638..845 | CDD:223796 | 51/197 (26%) | ||
RRM5_RBM19_like | 679..760 | CDD:240764 | 26/81 (32%) | ||
RRM6_RBM19 | 785..864 | CDD:241015 | 15/78 (19%) | ||
Rb97D | NP_001014671.1 | RRM1_hnRNPA_like | 33..110 | CDD:241022 | 28/86 (33%) |
RRM2_hnRNPA_like | 124..196 | CDD:240774 | 22/111 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45463968 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |